Os03g0844500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein phosphatase 2A B' regulatory subunit.
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Os03g0844500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein phosphatase 2A B' regulatory subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.85 | 0.181 | 11.1 | 0.307 | 0.444 | 0.148 | -0.301 | 0.342 | 0.159 | 4.06 | 24.73 | 266 | -- | -- |
| 15.1 | 0.181 | 11 | 0.417 | 0.424 | 0.19 | -0.178 | -- | 0.195 | 3.79 | 25.3 | 360 | -- | -- |
| 15.03 | 0.181 | 11.1 | 0.344 | 0.446 | 0.148 | -- | 0.216 | 0.167 | 4.14 | 24.5 | 263 | -- | -- |
| 15.19 | 0.182 | 11 | 0.406 | 0.452 | 0.153 | -- | -- | 0.18 | 4.02 | 24.9 | 333 | -- | -- |
| 21.14 | 0.214 | 11.1 | 0.405 | -- | 0.381 | -- | 0.368 | 0.205 | -- | 26.6 | 273 | -- | -- |
| 16.54 | 0.191 | 11.1 | 0.362 | 0.542 | -- | -0.0696 | -- | 0.114 | 4.27 | -- | -- | -- | -- |
| 16.55 | 0.191 | 11.1 | 0.363 | 0.541 | -- | -- | -- | 0.114 | 4.29 | -- | -- | -- | -- |
| 21.28 | 0.215 | 11 | 0.481 | -- | 0.394 | -- | -- | 0.223 | -- | 26.53 | 275 | -- | -- |
| 19.5 | 0.206 | 11.1 | -- | 0.48 | 0.11 | -- | -- | 0.122 | 4.09 | 25.07 | 348 | -- | -- |
| 32.35 | 0.266 | 11.1 | 0.385 | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
| 20.03 | 0.209 | 11.1 | -- | 0.548 | -- | -- | -- | 0.0735 | 4.28 | -- | -- | -- | -- |
| 27.22 | 0.243 | 11.1 | -- | -- | 0.356 | -- | -- | 0.152 | -- | 26.7 | 273 | -- | -- |
| 36.26 | 0.281 | 11.1 | -- | -- | -- | -- | -- | 0.0856 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 9 | 13.47 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 15 | 13.54 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 14 |
| 62 | 14.00 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 18 |
| 90 | 14.12 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 20 |
| 104 | 14.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 106 | 14.19 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 110 | 14.20 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 131 | 14.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 182 | 14.37 | temperature | 10 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 190 | 14.40 | temperature | 30 | 90 | < th | dose independent | sin | 3 | NA |
| 193 | 14.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 216 | 14.43 | temperature | 30 | 90 | < th | dose dependent | sin | 23 | NA |
| 223 | 14.44 | temperature | 25 | 270 | < th | dose independent | sin | 8 | NA |
| 240 | 14.45 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 252 | 14.47 | temperature | 25 | 270 | > th | dose dependent | sin | 9 | NA |
| 253 | 14.47 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 264 | 14.48 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 286 | 14.50 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 289 | 14.50 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 299 | 14.51 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 400 | 14.58 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 4 | 18 |
| 418 | 14.59 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 6 | 11 |
| 430 | 14.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 8 |
| 452 | 14.62 | temperature | 10 | 10 | > th | dose dependent | sin | 19 | NA |
| 459 | 14.62 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 485 | 14.64 | temperature | 25 | 270 | < th | dose independent | sin | 11 | NA |
| 491 | 14.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 9 |
| 519 | 14.66 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 4 |
| 555 | 14.68 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 12 |
| 559 | 14.68 | atmosphere | 1015 | 10 | < th | dose dependent | sin | 19 | NA |
| 560 | 14.68 | temperature | 25 | 720 | > th | dose dependent | rect. | 8 | 2 |
| 586 | 14.69 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 4 | 10 |
| 617 | 14.70 | atmosphere | 995 | 10 | > th | dose dependent | sin | 21 | NA |
| 639 | 14.71 | radiation | 40 | 270 | < th | dose independent | sin | 11 | NA |
| 640 | 14.71 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 15 |
| 646 | 14.71 | temperature | 10 | 90 | > th | dose dependent | sin | 20 | NA |
| 686 | 14.72 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 9 | 15 |
| 725 | 14.74 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 10 |
| 733 | 14.74 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 744 | 14.74 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 795 | 14.76 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 9 |
| 822 | 14.77 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 11 |
| 838 | 14.77 | radiation | 40 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 886 | 14.79 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 11 | 9 |
| 894 | 14.79 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 20 |
| 896 | 14.79 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 20 |
| 898 | 14.79 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 22 |
| 922 | 14.80 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 10 |
| 932 | 14.80 | temperature | 10 | 720 | > th | dose dependent | sin | 2 | NA |
| 963 | 14.81 | atmosphere | 1000 | 10 | > th | dose independent | sin | 21 | NA |