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Os03g0844100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pti1 kinase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0124) R2 : 0.512
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.598 (0.0294) R2dC : 0.443 R2C : 0.426
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.206 (0.026) R2dN8 : 0.0867 R2N8 : 0.0695
σ : 0.233
deviance : 24.84
__
_____
C
peak time of C : 23.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.27 0.206 11.5 0.295 0.218 0.461 -0.241 0.325 0.268 21.2 23.34 108 -- --
19.58 0.206 11.5 0.308 0.231 0.448 -0.0967 -- 0.279 21.2 22.83 106 -- --
19.35 0.205 11.5 0.301 0.237 0.452 -- 0.195 0.265 21.3 23.49 119 -- --
19.51 0.206 11.5 0.294 0.22 0.461 -- -- 0.274 21.3 23.4 106 -- --
20.15 0.209 11.5 0.286 -- 0.537 -- 0.12 0.274 -- 16.12 57 -- --
22.76 0.224 11.5 0.278 0.595 -- 0.189 -- 0.237 23.8 -- -- -- --
22.91 0.224 11.5 0.271 0.594 -- -- -- 0.236 23.7 -- -- -- --
20.21 0.209 11.5 0.283 -- 0.537 -- -- 0.274 -- 16.38 55 -- --
21.82 0.218 11.5 -- 0.214 0.44 -- -- 0.231 21.5 20 104 -- --
45.14 0.314 11.5 0.288 -- -- -- -- 0.244 -- -- -- -- --
24.84 0.233 11.5 -- 0.598 -- -- -- 0.206 23.8 -- -- -- --
22.28 0.22 11.5 -- -- 0.534 -- -- 0.243 -- 14.79 55 -- --
47.33 0.321 11.5 -- -- -- -- -- 0.212 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.26 radiation 1.0 30 < th dose independent sin 21 NA
2 18.26 radiation 10.0 30 < th dose dependent sin 20 NA
3 18.31 radiation 1.0 30 > th dose independent sin 22 NA
10 18.39 radiation 20.0 30 < th dose dependent rect. 6 17
28 18.68 radiation 10.0 90 > th dose independent rect. 9 23
35 18.72 radiation 10.0 90 < th dose dependent rect. 6 13
41 18.75 radiation 1.0 90 < th dose independent rect. 6 13
43 18.77 radiation 1.0 30 < th dose independent rect. 7 16
50 18.81 humidity 70.0 30 > th dose dependent rect. 6 17
71 18.91 temperature 25.0 30 > th dose dependent rect. 10 8
90 19.01 radiation 30.0 90 < th dose dependent rect. 17 18
92 19.02 humidity 70.0 10 > th dose dependent rect. 6 14
93 19.03 humidity 80.0 90 < th dose independent rect. 9 8
106 19.06 temperature 25.0 90 > th dose dependent rect. 19 22
121 19.12 temperature 25.0 270 > th dose dependent rect. 19 20
122 19.13 radiation 1.0 10 < th dose independent rect. 11 12
129 19.14 radiation 20.0 90 < th dose dependent rect. 15 23
136 19.15 radiation 20.0 90 < th dose dependent rect. 11 23
138 19.16 humidity 80.0 90 < th dose independent rect. 7 10
143 19.17 temperature 25.0 30 > th dose dependent rect. 12 6
147 19.17 temperature 10.0 30 > th dose dependent rect. 23 18
153 19.18 radiation 20.0 90 < th dose dependent rect. 13 22
157 19.20 humidity 80.0 10 < th dose independent rect. 7 11
168 19.21 radiation 1.0 10 < th dose independent rect. 13 10
175 19.22 temperature 10.0 90 > th dose dependent rect. 9 8
182 19.23 radiation 10.0 30 < th dose dependent rect. 13 10
187 19.23 temperature 25.0 90 > th dose dependent rect. 23 18
194 19.24 radiation 20.0 90 < th dose dependent rect. 5 23
209 19.27 humidity 80.0 10 > th dose independent rect. 6 17
236 19.30 radiation 20.0 90 < th dose dependent rect. 15 20
251 19.32 temperature 25.0 270 > th dose dependent rect. 10 4
254 19.32 temperature 25.0 90 > th dose dependent rect. 3 14
260 19.33 radiation 1.0 10 < th dose independent rect. 15 8
261 19.33 radiation 10.0 90 > th dose independent rect. 9 9
278 19.33 radiation 20.0 90 < th dose dependent no NA NA
345 19.41 radiation 20.0 90 < th dose independent rect. 17 18
372 19.44 radiation 10.0 90 > th dose independent no NA NA
374 19.44 radiation 10.0 90 > th dose independent rect. 6 12
522 19.49 humidity 70.0 30 > th dose dependent sin 22 NA
535 19.51 radiation 1.0 90 > th dose dependent sin 18 NA
538 19.51 radiation 1.0 10 < th dose dependent rect. 15 8
548 19.52 atmosphere 1000.0 30 > th dose independent rect. 17 6
553 19.52 precipitation 0.1 270 < th dose independent rect. 18 23
562 19.52 precipitation 0.1 270 < th dose dependent rect. 18 23
564 19.53 humidity 80.0 270 < th dose independent rect. 9 6
565 19.53 humidity 80.0 10 > th dose independent rect. 6 14
624 19.57 radiation 1.0 90 < th dose independent rect. 9 10
658 19.59 radiation 1.0 43200 < th dose dependent rect. 24 3
695 19.62 humidity 80.0 90 < th dose independent rect. 11 6
734 19.65 humidity 80.0 90 < th dose independent rect. 21 20
764 19.66 temperature 25.0 10 > th dose dependent rect. 10 20
778 19.67 radiation 10.0 90 < th dose dependent rect. 9 10
789 19.68 temperature 25.0 30 > th dose dependent sin 21 NA
863 19.72 radiation 1.0 10 < th dose independent rect. 11 9
875 19.72 temperature 25.0 10 > th dose dependent rect. 10 16
881 19.73 radiation 10.0 90 > th dose independent rect. 11 20
905 19.74 temperature 25.0 10 > th dose dependent rect. 10 12
914 19.74 temperature 10.0 90 > th dose dependent rect. 20 21
918 19.75 radiation 10.0 270 > th dose independent rect. 16 23
934 19.76 radiation 1.0 90 < th dose independent rect. 15 4
935 19.76 radiation 10.0 270 > th dose independent rect. 9 6
946 19.76 radiation 1.0 43200 < th dose dependent rect. 24 1
977 19.77 humidity 70.0 270 > th dose independent rect. 3 16
981 19.77 atmosphere 1000.0 10 > th dose independent rect. 6 17
986 19.77 humidity 80.0 10 < th dose independent rect. 20 22