Os03g0843900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Poly glycohydrolase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0843900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Poly glycohydrolase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.72 | 0.174 | 10.7 | -0.468 | 0.315 | -0.41 | 0.696 | 0.0193 | 0.0392 | 8.33 | 0.5955 | 249 | -- | -- |
| 13.72 | 0.173 | 10.7 | -0.468 | 0.315 | -0.413 | 0.701 | -- | 0.0387 | 8.36 | 0.4576 | 248 | -- | -- |
| 15.06 | 0.181 | 10.7 | -0.45 | 0.344 | -0.382 | -- | 0.315 | 0.0353 | 7.96 | -9.429 | 206 | -- | -- |
| 15.25 | 0.182 | 10.7 | -0.449 | 0.318 | -0.39 | -- | -- | 0.037 | 8.04 | -17.32 | 248 | -- | -- |
| 17.4 | 0.194 | 10.7 | -0.441 | -- | -0.484 | -- | -0.327 | 0.0571 | -- | -5.116 | 620 | -- | -- |
| 16.62 | 0.191 | 10.7 | -0.466 | 0.41 | -- | 0.525 | -- | 0.0125 | 5.96 | -- | -- | -- | -- |
| 17.18 | 0.194 | 10.7 | -0.463 | 0.415 | -- | -- | -- | 0.00994 | 5.55 | -- | -- | -- | -- |
| 17.52 | 0.195 | 10.7 | -0.43 | -- | -0.495 | -- | -- | 0.0608 | -- | -4.568 | 566 | -- | -- |
| 20.52 | 0.211 | 10.7 | -- | 0.306 | -0.433 | -- | -- | 0.0905 | 8.48 | -28.62 | 258 | -- | -- |
| 26.12 | 0.239 | 10.7 | -0.449 | -- | -- | -- | -- | 0.02 | -- | -- | -- | -- | -- |
| 22.83 | 0.224 | 10.7 | -- | 0.407 | -- | -- | -- | 0.0615 | 5.6 | -- | -- | -- | -- |
| 22.38 | 0.22 | 10.7 | -- | -- | -0.508 | -- | -- | 0.111 | -- | -6.407 | 613 | -- | -- |
| 31.45 | 0.262 | 10.7 | -- | -- | -- | -- | -- | 0.0698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.47 | radiation | 40 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 2 | 13.48 | radiation | 10 | 270 | < th | dose independent | rect. | 1 | 22 |
| 3 | 13.51 | radiation | 40 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 6 | 13.56 | radiation | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 8 | 13.58 | radiation | 20 | 270 | < th | dose independent | rect. | 10 | 22 |
| 16 | 13.64 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 16 |
| 19 | 13.66 | radiation | 40 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 20 | 13.66 | radiation | 1 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 24 | 13.68 | radiation | 1 | 270 | > th | dose dependent | sin | 1 | NA |
| 25 | 13.68 | radiation | 1 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 56 | 13.73 | radiation | 1 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 81 | 13.76 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 23 |
| 98 | 13.77 | radiation | 1 | 270 | > th | dose dependent | no | NA | NA |
| 188 | 13.80 | radiation | 40 | 270 | < th | dose independent | rect. | 2 | 9 |
| 192 | 13.80 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 213 | 13.82 | radiation | 1 | 90 | > th | dose dependent | sin | 20 | NA |
| 217 | 13.83 | radiation | 40 | 270 | < th | dose dependent | no | NA | NA |
| 228 | 13.84 | radiation | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 232 | 13.86 | radiation | 40 | 270 | < th | dose independent | rect. | 2 | 11 |
| 235 | 13.87 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 18 |
| 245 | 13.88 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 252 | 13.89 | radiation | 10 | 270 | < th | dose independent | rect. | 13 | 22 |
| 260 | 13.90 | radiation | 10 | 30 | < th | dose independent | rect. | 5 | 21 |
| 263 | 13.90 | radiation | 10 | 270 | < th | dose independent | rect. | 16 | 23 |
| 320 | 13.93 | radiation | 10 | 90 | > th | dose independent | sin | 21 | NA |
| 343 | 13.95 | radiation | 10 | 270 | < th | dose independent | no | NA | NA |
| 364 | 13.96 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 20 |
| 369 | 13.96 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 373 | 13.96 | radiation | 20 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 598 | 14.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 664 | 14.01 | radiation | 40 | 270 | < th | dose independent | rect. | 2 | 13 |
| 749 | 14.04 | radiation | 40 | 270 | < th | dose independent | rect. | 11 | 11 |
| 764 | 14.05 | radiation | 20 | 270 | < th | dose independent | rect. | 16 | 16 |
| 771 | 14.05 | radiation | 40 | 270 | < th | dose independent | rect. | 12 | 23 |
| 781 | 14.05 | radiation | 40 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 786 | 14.06 | radiation | 20 | 270 | > th | dose independent | rect. | 15 | 23 |
| 834 | 14.09 | radiation | 20 | 270 | > th | dose independent | sin | 1 | NA |
| 840 | 14.09 | radiation | 40 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 852 | 14.11 | radiation | 10 | 90 | > th | dose independent | rect. | 8 | 10 |
| 858 | 14.11 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 16 |
| 883 | 14.12 | radiation | 10 | 90 | < th | dose independent | rect. | 10 | 13 |
| 890 | 14.12 | radiation | 10 | 270 | < th | dose independent | rect. | 20 | 23 |
| 893 | 14.12 | radiation | 30 | 90 | < th | dose dependent | rect. | 11 | 12 |
| 919 | 14.14 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 9 |
| 938 | 14.14 | radiation | 40 | 270 | < th | dose independent | rect. | 1 | 22 |
| 959 | 14.15 | radiation | 40 | 270 | < th | dose independent | sin | 6 | NA |
| 964 | 14.15 | humidity | 70 | 270 | > th | dose independent | rect. | 13 | 19 |