Os03g0842900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Steroleosin-B.
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Os03g0842900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Steroleosin-B.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58 | 0.355 | 2.65 | 2.39 | 0.0409 | 19.5 | -0.276 | -119 | -0.0549 | 2.85 | 995 | 1442 | -- | -- |
| 61.83 | 0.369 | 3.06 | -0.00998 | 0.0905 | -0.307 | -0.0895 | -- | -0.0547 | 4.79 | 998.1 | 3638 | -- | -- |
| 57.92 | 0.354 | 2.66 | 2.35 | 0.0557 | 19.2 | -- | -117 | -0.0536 | 5.46 | 995 | 1118 | -- | -- |
| 58.37 | 0.356 | 3.05 | -0.0149 | 0.0369 | -0.916 | -- | -- | -0.0727 | 4.93 | 996.3 | 1070 | -- | -- |
| 57.09 | 0.352 | 2.71 | 2.07 | -- | 18.9 | -- | -117 | -0.0473 | -- | 995.4 | 979 | -- | -- |
| 63.42 | 0.373 | 3.06 | 0.022 | 0.0913 | -- | -0.0542 | -- | -0.0665 | 5.21 | -- | -- | -- | -- |
| 63.42 | 0.373 | 3.06 | 0.0223 | 0.092 | -- | -- | -- | -0.0661 | 5.63 | -- | -- | -- | -- |
| 58.26 | 0.356 | 3.06 | -0.0152 | -- | -1.11 | -- | -- | -0.0477 | -- | 996.2 | 1049 | -- | -- |
| 57.99 | 0.355 | 3.06 | -- | 0.0703 | -1.08 | -- | -- | -0.0458 | 6.41 | 996.2 | 1049 | -- | -- |
| 63.86 | 0.373 | 3.06 | 0.0252 | -- | -- | -- | -- | -0.0639 | -- | -- | -- | -- | -- |
| 63.43 | 0.373 | 3.06 | -- | 0.0923 | -- | -- | -- | -0.0686 | 5.62 | -- | -- | -- | -- |
| 58.27 | 0.356 | 3.06 | -- | -- | -1.11 | -- | -- | -0.0461 | -- | 996.2 | 1049 | -- | -- |
| 63.88 | 0.373 | 3.06 | -- | -- | -- | -- | -- | -0.0667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.79 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 9 | 42.79 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 27 | 43.09 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 33 | 45.37 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 48 | 50.09 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 49 | 50.09 | wind | 1.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 68 | 51.10 | temperature | 25.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 75 | 51.25 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 254 | 56.35 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 274 | 56.35 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 382 | 57.22 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 385 | 57.22 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 389 | 57.23 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 1 |
| 391 | 57.23 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 417 | 57.41 | atmosphere | 1000.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 425 | 57.45 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 491 | 57.74 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 512 | 57.80 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 521 | 57.82 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 20 |
| 523 | 57.83 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 13 |
| 524 | 57.83 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 526 | 57.83 | atmosphere | 1000.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 529 | 57.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 533 | 57.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 543 | 57.88 | atmosphere | 995.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 546 | 57.89 | atmosphere | 995.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 567 | 57.92 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 568 | 57.92 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 573 | 57.92 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 579 | 57.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 586 | 57.94 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 594 | 57.96 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 598 | 57.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 599 | 57.96 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 614 | 57.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 616 | 57.99 | atmosphere | 995.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 643 | 57.99 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 14 | 14 |
| 661 | 57.99 | atmosphere | 995.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 707 | 58.00 | atmosphere | 995.0 | 1440 | > th | dose independent | no | NA | NA |
| 708 | 58.00 | atmosphere | 995.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 732 | 58.00 | atmosphere | 995.0 | 1440 | < th | dose independent | no | NA | NA |