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Os03g0840400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Homeodomain-like containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.48 (0.0214) R2 : 0.000626
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0241 (0.0451) R2dN8 : 0.000809 R2N8 : 0.000626
σ : 0.403
deviance : 74.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.51 0.327 8.37 1.2 0.352 -0.757 -0.00425 2.33 0.307 16.7 10.12 1500 -- --
52.98 0.339 8.42 0.859 0.34 -0.761 -0.153 -- 0.259 17 12 8329 -- --
48.51 0.324 8.37 1.2 0.352 -0.757 -- 2.33 0.308 16.7 10.14 1501 -- --
53.01 0.339 8.42 0.848 0.342 -0.76 -- -- 0.255 17 8.602 8332 -- --
54.14 0.343 8.38 1.14 -- -0.821 -- 2.13 0.284 -- 14.14 1309 -- --
62.44 0.37 8.47 0.448 0.369 -- -0.0767 -- 0.0341 16.7 -- -- -- --
62.46 0.37 8.47 0.448 0.368 -- -- -- 0.0337 16.7 -- -- -- --
59.11 0.358 8.41 0.858 -- -0.798 -- -- 0.259 -- 8.107 8416 -- --
63.61 0.371 8.46 -- 0.325 -0.469 -- -- 0.0517 17.1 13.35 1278 -- --
69.66 0.39 8.47 0.434 -- -- -- -- 0.0241 -- -- -- -- --
67.75 0.385 8.48 -- 0.36 -- -- -- -0.0162 16.7 -- -- -- --
69.06 0.387 8.46 -- -- -0.535 -- -- 0.0541 -- 9.582 1255 -- --
74.63 0.403 8.48 -- -- -- -- -- -0.0241 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.47 temperature 30 270 < th dose dependent rect. 6 18
2 46.54 temperature 30 270 < th dose dependent rect. 5 20
4 46.58 temperature 30 10 < th dose dependent rect. 7 19
17 47.04 temperature 10 270 > th dose dependent rect. 23 22
24 47.27 radiation 1 4320 < th dose independent rect. 18 11
27 47.31 temperature 15 90 > th dose dependent sin 17 NA
28 47.34 radiation 1 4320 < th dose independent rect. 18 9
32 47.39 radiation 1 4320 < th dose independent rect. 18 7
34 47.43 radiation 1 4320 < th dose independent rect. 18 1
38 47.48 radiation 1 4320 > th dose independent rect. 18 11
39 47.49 humidity 90 14400 > th dose dependent rect. 24 11
42 47.50 humidity 90 14400 > th dose dependent rect. 1 9
43 47.51 radiation 1 4320 < th dose independent rect. 18 5
51 47.57 humidity 90 14400 > th dose dependent rect. 19 11
56 47.59 radiation 1 4320 > th dose independent rect. 18 1
66 47.59 humidity 90 14400 > th dose dependent rect. 21 10
71 47.60 humidity 90 14400 > th dose dependent rect. 19 9
76 47.62 humidity 90 14400 > th dose dependent sin 9 NA
103 47.72 humidity 90 14400 > th dose dependent rect. 22 5
166 47.97 radiation 30 4320 < th dose independent rect. 24 8
170 47.98 radiation 30 4320 < th dose independent rect. 6 2
171 47.98 radiation 30 4320 < th dose independent rect. 22 10
179 48.01 temperature 10 270 > th dose dependent rect. 9 11
181 48.02 radiation 30 4320 < th dose independent rect. 2 6
183 48.02 temperature 30 90 < th dose dependent rect. 11 15
193 48.06 radiation 30 4320 < th dose independent rect. 16 16
274 48.35 humidity 90 14400 > th dose independent rect. 1 7
281 48.35 temperature 10 1440 > th dose dependent rect. 7 20
286 48.37 humidity 90 14400 > th dose dependent rect. 4 3
301 48.40 temperature 10 1440 > th dose dependent rect. 6 17
315 48.42 temperature 10 1440 > th dose dependent rect. 6 12
322 48.43 wind 5 43200 < th dose dependent rect. 11 1
350 48.46 radiation 30 14400 < th dose independent rect. 16 2
351 48.46 temperature 10 1440 > th dose dependent rect. 1 17
364 48.47 temperature 10 1440 > th dose dependent rect. 21 22
366 48.48 temperature 10 1440 > th dose dependent sin 1 NA
395 48.50 radiation 1 43200 > th dose independent rect. 18 11
400 48.50 humidity 90 14400 > th dose dependent rect. 5 1
487 48.53 temperature 10 1440 > th dose dependent rect. 11 23
489 48.54 temperature 10 1440 > th dose dependent no NA NA
504 48.54 temperature 10 1440 > th dose dependent rect. 13 23
525 48.55 temperature 10 270 > th dose dependent rect. 8 23
528 48.56 wind 3 43200 < th dose dependent rect. 9 2
529 48.56 radiation 20 14400 < th dose dependent rect. 22 7
577 48.58 wind 7 43200 < th dose dependent rect. 9 5
594 48.58 temperature 10 1440 > th dose dependent rect. 15 23
611 48.59 temperature 10 720 > th dose dependent rect. 16 21
653 48.62 temperature 10 1440 > th dose dependent rect. 13 14
663 48.63 humidity 80 43200 < th dose dependent rect. 21 2
699 48.65 radiation 30 14400 < th dose independent rect. 16 11
701 48.65 wind 1 43200 > th dose dependent rect. 9 5
778 48.70 temperature 30 10 < th dose dependent rect. 15 12
842 48.75 radiation 30 14400 < th dose independent rect. 16 9
885 48.78 radiation 10 14400 > th dose independent rect. 5 1
899 48.78 temperature 10 1440 > th dose dependent rect. 7 2
914 48.79 temperature 30 1440 < th dose dependent rect. 7 2
915 48.79 temperature 30 90 < th dose dependent rect. 14 12
922 48.80 wind 3 43200 > th dose independent rect. 9 5
932 48.80 temperature 10 10 > th dose dependent rect. 24 23
942 48.81 wind 3 43200 > th dose dependent rect. 10 20
963 48.83 radiation 10 14400 < th dose dependent rect. 24 5
978 48.84 radiation 1 4320 > th dose independent rect. 17 17
979 48.84 wind 5 43200 > th dose independent rect. 11 19
980 48.84 wind 5 43200 < th dose independent rect. 11 19
995 48.85 radiation 30 14400 < th dose independent rect. 16 7