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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0839400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0189) R2 : 0.0715
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.235 (0.0397) R2dN8 : 0.0923 R2N8 : 0.0715
σ : 0.355
deviance : 57.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.68 0.351 2.93 -0.0397 0.0447 0.246 -0.181 0.636 0.278 7.57 71.97 7005 -- --
56.25 0.349 2.93 0.00551 0.0391 0.295 -0.148 -- 0.295 7.12 71 6924 -- --
55.77 0.348 2.93 -0.0429 0.047 0.248 -- 0.621 0.279 6.68 72 7004 -- --
56.3 0.349 2.93 -0.00522 0.0398 0.264 -- -- 0.302 6.16 70.55 8310 -- --
55.73 0.348 2.93 -0.054 -- 0.246 -- 0.624 0.279 -- 69.55 8323 -- --
57.64 0.356 2.95 0.0347 0.0466 -- -0.16 -- 0.238 7.79 -- -- -- --
57.71 0.356 2.95 0.0307 0.0464 -- -- -- 0.238 8.15 -- -- -- --
56.36 0.35 2.93 -0.00673 -- 0.312 -- -- 0.304 -- 73 6777 -- --
56.3 0.349 2.93 -- 0.0383 0.264 -- -- 0.301 6.14 70.59 8310 -- --
57.83 0.355 2.95 0.0311 -- -- -- -- 0.239 -- -- -- -- --
57.73 0.355 2.95 -- 0.0466 -- -- -- 0.235 8.1 -- -- -- --
56.35 0.35 2.93 -- -- 0.309 -- -- 0.302 -- 72.91 6777 -- --
57.85 0.355 2.95 -- -- -- -- -- 0.235 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.94 atmosphere 1005.0 30 > th dose dependent rect. 6 1
2 53.01 wind 3.0 30 < th dose dependent rect. 6 1
3 53.05 radiation 1.0 30 > th dose dependent rect. 6 1
7 53.30 temperature 30.0 30 < th dose dependent rect. 6 1
8 53.30 humidity 80.0 30 > th dose dependent rect. 6 1
10 53.34 wind 1.0 30 < th dose independent rect. 10 1
11 53.34 temperature 10.0 1440 > th dose independent rect. 11 1
15 53.34 atmosphere 995.0 1440 > th dose independent rect. 11 1
18 53.34 precipitation 0.1 1440 < th dose independent rect. 11 1
19 53.34 temperature 10.0 1440 > th dose independent rect. 12 23
23 53.34 wind 1.0 30 < th dose dependent rect. 10 1
24 53.34 precipitation 0.1 1440 < th dose dependent rect. 11 1
25 53.35 wind 3.0 30 < th dose independent rect. 6 1
26 53.36 humidity 70.0 30 < th dose independent rect. 10 1
29 53.41 temperature 25.0 30 > th dose dependent rect. 10 1
33 53.44 humidity 80.0 30 < th dose dependent rect. 10 1
34 53.47 wind 1.0 30 > th dose independent rect. 6 1
35 53.47 temperature 25.0 10 > th dose independent rect. 6 1
36 53.47 radiation 10.0 10 > th dose independent rect. 6 1
90 53.48 wind 9.0 1440 < th dose independent rect. 7 1
91 53.48 temperature 10.0 1440 > th dose independent rect. 7 1
95 53.48 temperature 30.0 1440 < th dose independent rect. 7 1
99 53.48 humidity 50.0 1440 > th dose independent rect. 7 1
104 53.48 atmosphere 995.0 1440 > th dose independent rect. 7 1
105 53.48 atmosphere 1015.0 1440 < th dose independent rect. 7 1
106 53.48 temperature 10.0 1440 > th dose independent rect. 8 23
109 53.49 humidity 90.0 30 < th dose independent rect. 6 1
114 53.51 temperature 10.0 30 > th dose independent rect. 6 1
117 53.51 temperature 30.0 30 < th dose independent rect. 6 1
118 53.51 humidity 50.0 30 > th dose independent rect. 6 1
123 53.51 atmosphere 995.0 30 > th dose independent rect. 6 1
124 53.51 atmosphere 1005.0 30 > th dose independent rect. 6 1
125 53.51 atmosphere 1015.0 30 < th dose independent rect. 6 1
126 53.51 radiation 20.0 30 < th dose independent rect. 6 1
129 53.51 precipitation 0.1 30 < th dose independent rect. 6 1
130 53.51 temperature 10.0 30 > th dose independent rect. 7 23
131 53.51 precipitation 0.1 30 < th dose dependent rect. 6 1
136 53.56 radiation 20.0 30 > th dose independent rect. 10 1
137 53.58 atmosphere 1005.0 30 > th dose dependent rect. 10 1
141 53.60 atmosphere 1005.0 30 > th dose independent rect. 10 1
143 53.61 temperature 25.0 30 > th dose independent rect. 10 1
147 53.63 temperature 10.0 30 > th dose dependent rect. 6 1
151 53.66 radiation 40.0 30 < th dose independent rect. 10 1
152 53.66 wind 5.0 30 < th dose dependent rect. 10 1
153 53.66 radiation 1.0 30 > th dose dependent rect. 10 1
154 53.67 atmosphere 1010.0 30 < th dose independent rect. 10 1
159 53.68 radiation 40.0 30 < th dose dependent rect. 6 1
161 53.69 humidity 60.0 30 > th dose independent rect. 10 1
167 53.70 temperature 10.0 30 > th dose independent rect. 10 1
169 53.70 temperature 30.0 30 < th dose independent rect. 10 1
175 53.70 precipitation 0.1 30 < th dose independent rect. 10 1
176 53.70 temperature 10.0 30 > th dose independent rect. 11 23
177 53.70 precipitation 0.1 30 < th dose dependent rect. 10 1
180 53.72 wind 1.0 30 > th dose independent rect. 10 1
214 53.91 atmosphere 1015.0 30 < th dose dependent rect. 10 1
217 53.93 radiation 40.0 30 < th dose dependent rect. 10 1
222 53.97 temperature 15.0 10 > th dose dependent rect. 24 6
223 53.98 wind 1.0 30 > th dose dependent rect. 10 1
233 54.08 humidity 50.0 30 > th dose dependent rect. 10 1
237 54.11 atmosphere 995.0 30 > th dose independent rect. 11 23
241 54.17 atmosphere 1015.0 30 < th dose dependent rect. 6 1
251 54.23 humidity 90.0 10 < th dose dependent rect. 6 1
256 54.27 precipitation 0.1 30 < th dose independent rect. 11 23
259 54.27 precipitation 0.1 30 < th dose dependent rect. 11 23
261 54.30 radiation 10.0 43200 < th dose dependent rect. 23 1
276 54.40 wind 9.0 30 < th dose independent rect. 7 23
299 54.51 wind 9.0 30 < th dose independent rect. 11 23
302 54.55 atmosphere 1010.0 10 < th dose independent rect. 24 10
310 54.58 wind 5.0 90 < th dose independent rect. 22 1
313 54.59 humidity 80.0 90 > th dose independent rect. 22 1
321 54.63 wind 1.0 90 > th dose independent rect. 22 1
334 54.65 humidity 90.0 10 < th dose dependent rect. 22 1
335 54.65 atmosphere 995.0 90 > th dose dependent rect. 22 1
337 54.66 wind 1.0 30 > th dose dependent rect. 6 1
338 54.66 temperature 20.0 270 > th dose dependent rect. 24 2
339 54.67 temperature 20.0 10 > th dose independent rect. 24 6
344 54.69 humidity 90.0 90 < th dose independent rect. 22 1
349 54.70 atmosphere 1005.0 10 > th dose independent rect. 22 1
350 54.71 wind 9.0 90 < th dose dependent rect. 22 1
353 54.73 wind 5.0 10 < th dose independent rect. 22 1
355 54.73 temperature 10.0 90 > th dose dependent rect. 22 1
356 54.73 temperature 30.0 30 < th dose dependent rect. 22 1
361 54.74 humidity 90.0 10 < th dose independent rect. 22 1
362 54.74 atmosphere 1000.0 90 > th dose independent rect. 22 1
363 54.74 atmosphere 995.0 10 > th dose independent rect. 23 23
369 54.75 temperature 10.0 10 > th dose independent rect. 22 1
371 54.75 temperature 30.0 10 < th dose independent rect. 22 1
372 54.75 humidity 50.0 10 > th dose independent rect. 22 1
375 54.75 atmosphere 995.0 10 > th dose independent rect. 22 1
377 54.75 atmosphere 1010.0 10 < th dose independent rect. 22 1
379 54.75 radiation 1.0 10 < th dose independent rect. 22 1
384 54.75 precipitation 0.1 10 < th dose independent rect. 22 1
385 54.75 precipitation 0.1 90 < th dose independent rect. 22 1
386 54.75 temperature 10.0 10 > th dose independent rect. 23 23
387 54.75 precipitation 0.1 90 < th dose independent rect. 23 23
388 54.75 wind 9.0 10 < th dose dependent rect. 22 1
390 54.75 atmosphere 995.0 10 > th dose dependent rect. 22 1
392 54.75 radiation 1.0 10 < th dose dependent rect. 22 1
397 54.75 precipitation 0.1 10 < th dose dependent rect. 22 1
398 54.75 precipitation 0.1 90 < th dose dependent rect. 22 1
400 54.75 precipitation 0.1 90 < th dose dependent rect. 23 23
402 54.76 temperature 10.0 90 > th dose independent rect. 22 1
403 54.76 temperature 30.0 90 < th dose independent rect. 22 1
404 54.76 humidity 50.0 90 > th dose independent rect. 22 1
408 54.76 radiation 1.0 90 < th dose independent rect. 22 1
414 54.76 temperature 10.0 90 > th dose independent rect. 23 23
416 54.76 radiation 1.0 90 < th dose dependent rect. 22 1
421 54.77 atmosphere 1015.0 90 < th dose independent rect. 22 1
422 54.77 atmosphere 1015.0 10 < th dose dependent rect. 22 1
425 54.79 temperature 10.0 10 > th dose dependent rect. 22 1
426 54.79 humidity 50.0 10 > th dose dependent rect. 22 1
429 54.79 wind 9.0 10 < th dose dependent rect. 6 18
452 54.80 wind 1.0 30 > th dose dependent rect. 22 1
476 54.83 temperature 25.0 90 > th dose independent rect. 22 1
480 54.84 precipitation 0.1 10 < th dose independent rect. 23 23
487 54.84 precipitation 0.1 10 < th dose dependent rect. 23 23
497 54.87 wind 9.0 1440 < th dose independent rect. 23 1
498 54.87 temperature 10.0 1440 > th dose independent rect. 23 1
501 54.87 temperature 30.0 1440 < th dose independent rect. 23 1
506 54.87 humidity 50.0 1440 > th dose independent rect. 23 1
516 54.87 atmosphere 995.0 1440 > th dose independent rect. 23 1
517 54.87 radiation 1.0 1440 < th dose independent rect. 23 1
538 54.87 temperature 10.0 1440 > th dose independent rect. 24 23
541 54.87 atmosphere 995.0 30 > th dose independent rect. 7 23
544 54.87 temperature 25.0 30 > th dose dependent rect. 22 1
545 54.87 radiation 1.0 1440 < th dose dependent rect. 23 1
554 54.87 atmosphere 995.0 10 > th dose dependent rect. 24 6
561 54.88 atmosphere 1015.0 10 < th dose independent rect. 6 18
582 54.92 wind 3.0 30 < th dose independent rect. 6 18
585 54.92 wind 9.0 10 < th dose dependent rect. 24 6
587 54.93 precipitation 0.1 10 < th dose independent rect. 6 18
590 54.93 precipitation 0.1 30 < th dose independent rect. 7 23
591 54.93 precipitation 0.1 10 < th dose dependent rect. 6 18
593 54.93 precipitation 0.1 30 < th dose dependent rect. 7 23
596 54.94 wind 9.0 10 < th dose independent rect. 24 6
597 54.94 temperature 10.0 10 > th dose independent rect. 24 6
599 54.94 temperature 30.0 10 < th dose independent rect. 24 6
600 54.94 humidity 50.0 10 > th dose independent rect. 24 6
603 54.94 atmosphere 995.0 10 > th dose independent rect. 24 6
604 54.94 radiation 20.0 10 < th dose independent rect. 24 6
607 54.94 temperature 10.0 10 > th dose independent rect. 6 18
615 54.95 atmosphere 1010.0 10 < th dose independent rect. 24 6
616 54.95 precipitation 0.1 10 < th dose independent rect. 24 6
619 54.95 precipitation 0.1 10 < th dose dependent rect. 24 6
623 54.96 radiation 40.0 10 < th dose dependent rect. 24 6
629 54.97 radiation 1.0 90 < th dose independent rect. 23 11
632 54.97 wind 1.0 10 > th dose independent rect. 6 18
635 54.98 radiation 1.0 90 < th dose independent rect. 23 9
663 55.00 wind 9.0 10 < th dose independent rect. 6 18
665 55.00 wind 9.0 90 < th dose independent rect. 23 23
674 55.02 humidity 50.0 10 > th dose dependent rect. 24 6
720 55.07 temperature 10.0 1440 > th dose independent rect. 1 6
723 55.07 temperature 30.0 1440 < th dose independent rect. 1 6
727 55.07 humidity 50.0 1440 > th dose independent rect. 1 6
733 55.07 atmosphere 995.0 1440 > th dose independent rect. 1 6
734 55.07 radiation 40.0 1440 < th dose independent rect. 1 6
738 55.07 temperature 10.0 1440 > th dose independent rect. 7 18
749 55.09 humidity 50.0 10 > th dose independent rect. 6 18
750 55.09 atmosphere 995.0 10 > th dose independent rect. 6 18
758 55.10 radiation 1.0 90 < th dose dependent rect. 23 11
762 55.11 radiation 20.0 10 < th dose independent rect. 8 22
763 55.11 humidity 50.0 30 > th dose independent rect. 11 23
767 55.11 radiation 1.0 90 < th dose dependent rect. 23 9
771 55.11 radiation 10.0 30 < th dose dependent rect. 23 23
825 55.19 temperature 10.0 10 > th dose dependent rect. 16 14
830 55.20 temperature 20.0 10 > th dose independent rect. 16 14
847 55.24 wind 1.0 43200 < th dose dependent rect. 5 1
849 55.24 wind 9.0 10 < th dose dependent rect. 6 10
851 55.25 precipitation 0.1 90 < th dose independent rect. 11 10
854 55.25 precipitation 0.1 90 < th dose dependent rect. 11 10
858 55.27 wind 5.0 90 < th dose independent rect. 21 14
874 55.29 wind 3.0 30 < th dose independent rect. 6 5
877 55.29 humidity 80.0 4320 < th dose dependent rect. 23 1
909 55.33 temperature 10.0 30 > th dose dependent rect. 11 23
920 55.35 wind 9.0 10 < th dose dependent rect. 10 14
921 55.35 atmosphere 995.0 10 > th dose dependent rect. 6 18
922 55.36 temperature 10.0 90 > th dose independent rect. 11 10
923 55.36 atmosphere 1015.0 90 < th dose independent rect. 11 10
926 55.36 temperature 10.0 90 > th dose independent rect. 21 14
927 55.36 atmosphere 995.0 90 > th dose independent rect. 21 14
928 55.36 wind 1.0 10 > th dose independent rect. 6 22
934 55.36 temperature 10.0 90 > th dose dependent rect. 23 10
938 55.37 temperature 30.0 90 < th dose independent rect. 21 14
939 55.37 precipitation 0.1 90 < th dose independent rect. 21 14
951 55.37 precipitation 0.1 90 < th dose dependent rect. 21 14
954 55.38 humidity 50.0 90 > th dose independent rect. 21 14
955 55.38 temperature 20.0 10 > th dose independent rect. 14 16
956 55.38 humidity 80.0 30 > th dose independent rect. 6 18
957 55.38 atmosphere 1010.0 10 < th dose independent rect. 24 22
960 55.38 radiation 40.0 10 < th dose dependent rect. 24 10
962 55.39 wind 3.0 43200 > th dose independent rect. 6 1
967 55.39 radiation 1.0 90 < th dose independent rect. 23 22
973 55.39 radiation 1.0 270 < th dose dependent rect. 16 7
976 55.40 humidity 80.0 4320 < th dose independent rect. 23 1
989 55.41 temperature 20.0 10 > th dose independent rect. 2 4
991 55.41 atmosphere 1015.0 90 < th dose independent rect. 23 22