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Os03g0837100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cellulose synthase-6.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.12 (0.0415) R2 : 0.583
β1 : -3.58 (0.157) R2dD : 0.526 R2D : 0.3
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.07 (0.133) R2dE : 0.236 R2E : 0.062
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.564 (0.0889) R2dN8 : 0.0496 R2N8 : -0.0186
σ : 0.777
deviance : 278.41
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C
peak time of C : --
E
wheather : temperature
threshold : 26.14
memory length : 1066
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
269.57 0.771 8.16 -4.08 0.452 2.01 0.838 -3.08 -0.433 22.1 28.21 1206 -- --
270.01 0.765 8.11 -3.49 0.45 1.74 0.737 -- -0.45 21.7 27.3 1203 -- --
271.18 0.767 8.17 -4.1 0.472 2.03 -- -2.82 -0.478 20.9 27.87 1206 -- --
271.12 0.767 8.11 -3.54 0.463 1.78 -- -- -0.463 20.8 27.17 1195 -- --
278 0.777 8.17 -3.98 -- 2.26 -- -1.98 -0.64 -- 26.18 1066 -- --
392.89 0.929 8.12 -2.97 0.664 -- 1.34 -- -0.48 23.2 -- -- -- --
399.57 0.936 8.12 -3.02 0.678 -- -- -- -0.481 22.4 -- -- -- --
278.41 0.777 8.12 -3.58 -- 2.07 -- -- -0.564 -- 26.14 1066 -- --
573.45 1.12 7.98 -- 0.556 1.21 -- -- 0.116 20.7 31.79 1096 -- --
427.62 0.966 8.1 -3.01 -- -- -- -- -0.479 -- -- -- -- --
639.71 1.18 8.04 -- 0.663 -- -- -- -0.145 22.1 -- -- -- --
589.7 1.13 7.97 -- -- 1.24 -- -- 0.108 -- 31.95 1059 -- --
666.22 1.2 8.03 -- -- -- -- -- -0.146 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 271.61 radiation 40 1440 > th dose dependent rect. 13 20
2 272.13 radiation 40 1440 > th dose dependent rect. 13 3
21 272.86 radiation 20 1440 > th dose independent rect. 16 15
22 273.55 radiation 40 1440 > th dose dependent sin 13 NA
23 274.23 temperature 25 720 > th dose dependent rect. 17 6
25 275.17 temperature 25 720 > th dose dependent rect. 17 15
30 276.18 radiation 20 1440 > th dose dependent rect. 16 16
33 276.61 temperature 25 720 > th dose dependent sin 14 NA
37 276.85 radiation 10 1440 < th dose dependent rect. 18 9
38 276.90 radiation 20 1440 < th dose independent rect. 16 15
40 277.00 temperature 30 720 > th dose dependent rect. 18 1
57 277.24 radiation 10 1440 < th dose dependent rect. 18 7
59 277.30 humidity 70 720 > th dose independent rect. 18 8
64 277.43 radiation 20 1440 > th dose independent rect. 16 1
81 277.65 humidity 70 720 > th dose independent sin 12 NA
83 277.80 radiation 20 1440 < th dose independent rect. 16 1
84 277.81 temperature 30 1440 > th dose dependent rect. 13 6
134 278.14 radiation 20 1440 < th dose independent rect. 16 11
139 278.25 radiation 20 1440 < th dose independent rect. 16 9
154 278.55 radiation 20 1440 < th dose independent rect. 16 7
208 278.92 radiation 20 1440 < th dose independent rect. 16 5
228 279.01 humidity 70 720 < th dose independent sin 12 NA
231 279.14 humidity 50 1440 < th dose independent rect. 16 1
258 279.37 temperature 30 1440 > th dose dependent no NA NA
352 279.47 humidity 50 1440 < th dose dependent rect. 16 1
363 279.83 humidity 80 720 < th dose dependent rect. 17 4
365 279.88 radiation 30 14400 > th dose independent rect. 16 16
407 280.26 temperature 30 1440 < th dose independent rect. 17 19
417 280.65 temperature 30 720 < th dose independent rect. 17 9
423 280.76 temperature 30 1440 > th dose independent sin 12 NA
424 280.78 temperature 30 1440 < th dose independent sin 11 NA
427 280.81 humidity 70 1440 < th dose dependent rect. 16 15
442 280.90 humidity 70 1440 < th dose independent rect. 18 13
449 281.02 humidity 80 720 < th dose dependent rect. 18 1
450 281.03 temperature 30 1440 > th dose independent rect. 16 3
464 281.03 temperature 30 1440 > th dose independent rect. 17 21
502 281.18 humidity 70 1440 < th dose independent rect. 18 2
524 281.49 temperature 30 1440 > th dose independent rect. 17 19
528 281.64 radiation 1 720 > th dose independent rect. 18 11
534 281.78 humidity 70 720 > th dose independent rect. 17 14
546 281.98 radiation 10 1440 < th dose dependent rect. 18 5
547 282.02 temperature 30 1440 < th dose independent rect. 16 11
552 282.06 temperature 30 1440 < th dose independent rect. 16 16
561 282.17 temperature 30 1440 < th dose independent rect. 16 7
567 282.25 temperature 30 1440 < th dose independent rect. 16 5
591 282.49 humidity 50 1440 > th dose independent rect. 16 1
663 282.95 temperature 30 1440 > th dose independent rect. 9 10
705 283.26 temperature 30 1440 < th dose independent rect. 9 23
706 283.29 temperature 30 1440 < th dose independent rect. 9 18
710 283.31 temperature 30 1440 < th dose independent rect. 9 16
714 283.32 radiation 1 1440 > th dose dependent rect. 18 12
716 283.34 temperature 30 1440 < th dose independent rect. 9 14
717 283.36 temperature 30 1440 < th dose independent rect. 9 12
721 283.38 temperature 30 1440 < th dose independent rect. 9 10
754 283.54 radiation 10 1440 < th dose dependent rect. 18 3
755 283.55 radiation 30 1440 < th dose independent rect. 7 1
756 283.56 temperature 30 1440 < th dose independent rect. 9 4
783 283.73 radiation 30 1440 > th dose independent rect. 7 1
809 283.83 radiation 10 1440 > th dose dependent rect. 16 2
825 283.86 temperature 30 1440 > th dose independent rect. 13 23
828 283.90 temperature 30 1440 > th dose independent rect. 9 5
871 284.11 temperature 30 1440 < th dose independent rect. 6 21
875 284.12 temperature 30 1440 < th dose independent rect. 2 23
877 284.13 temperature 30 1440 > th dose independent no NA NA
924 284.13 temperature 30 1440 < th dose independent rect. 6 19
974 284.13 temperature 30 1440 < th dose independent rect. 24 23
979 284.14 temperature 30 1440 < th dose independent rect. 20 23
980 284.14 temperature 30 1440 < th dose independent rect. 22 23
981 284.15 temperature 30 1440 < th dose independent no NA NA
984 284.15 temperature 30 1440 < th dose independent rect. 24 21
985 284.15 temperature 25 1440 > th dose dependent rect. 7 1
990 284.16 temperature 30 1440 < th dose independent rect. 2 21
992 284.16 temperature 30 1440 < th dose independent rect. 22 21
995 284.17 humidity 70 14400 < th dose independent rect. 18 13
998 284.17 temperature 30 1440 < th dose independent rect. 24 19