Os03g0835300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0835300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 180.72 | 0.632 | 5.41 | 1.71 | 0.468 | -0.717 | -1.94 | 0.445 | 1 | 7.77 | 10.07 | 11 | -- | -- |
| 180.68 | 0.626 | 5.41 | 1.68 | 0.467 | -0.702 | -1.9 | -- | 1.01 | 7.4 | 13.93 | 13 | -- | -- |
| 189.1 | 0.64 | 5.39 | 1.69 | 0.457 | -0.775 | -- | -0.0597 | 1.06 | 7.89 | 13.93 | 16 | -- | -- |
| 188.81 | 0.64 | 5.41 | 1.66 | 0.464 | -0.738 | -- | -- | 1.02 | 7.85 | 13.93 | 13 | -- | -- |
| 198.52 | 0.656 | 5.42 | 1.7 | -- | -0.655 | -- | -0.151 | 1.04 | -- | 15.69 | 25 | -- | -- |
| 208.3 | 0.677 | 5.43 | 1.6 | 0.666 | -- | -0.413 | -- | 1 | 3.14 | -- | -- | -- | -- |
| 208.66 | 0.676 | 5.43 | 1.6 | 0.661 | -- | -- | -- | 1 | 2.8 | -- | -- | -- | -- |
| 198.01 | 0.655 | 5.41 | 1.69 | -- | -0.67 | -- | -- | 1.06 | -- | 15.69 | 76 | -- | -- |
| 261.8 | 0.754 | 5.46 | -- | 0.445 | -0.72 | -- | -- | 0.822 | 7.57 | 15.87 | 18 | -- | -- |
| 233.96 | 0.715 | 5.42 | 1.63 | -- | -- | -- | -- | 1.02 | -- | -- | -- | -- | -- |
| 276.45 | 0.778 | 5.47 | -- | 0.692 | -- | -- | -- | 0.825 | 2.82 | -- | -- | -- | -- |
| 269.11 | 0.764 | 5.47 | -- | -- | -0.651 | -- | -- | 0.831 | -- | 9.05 | 173 | -- | -- |
| 304.22 | 0.814 | 5.46 | -- | -- | -- | -- | -- | 0.839 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.51 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 11 |
| 2 | 170.92 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 6 | 171.94 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 18 | 172.85 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 22 | 173.29 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 22 |
| 30 | 173.79 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 44 | 174.41 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 47 | 174.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 89 | 175.69 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 104 | 175.95 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 105 | 175.96 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 107 | 175.98 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 10 |
| 133 | 176.22 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 139 | 176.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 149 | 176.46 | humidity | 70.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 150 | 176.46 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 159 | 176.53 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 171 | 176.67 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 187 | 176.90 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 194 | 177.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 199 | 177.13 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 235 | 177.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 237 | 177.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 243 | 177.60 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 245 | 177.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 250 | 177.68 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 268 | 177.84 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 281 | 177.96 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 292 | 178.06 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 306 | 178.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 311 | 178.09 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 313 | 178.11 | radiation | 10.0 | 90 | > th | dose independent | sin | 2 | NA |
| 335 | 178.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 336 | 178.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 338 | 178.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 339 | 178.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 342 | 178.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 343 | 178.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 344 | 178.22 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 347 | 178.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 352 | 178.25 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 402 | 178.47 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 416 | 178.51 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 6 | 8 |
| 430 | 178.59 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 17 |
| 439 | 178.63 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 11 |
| 451 | 178.69 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 8 |
| 456 | 178.70 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 22 |
| 459 | 178.71 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 493 | 178.85 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 6 | 10 |
| 497 | 178.87 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 501 | 178.91 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 523 | 179.02 | radiation | 10.0 | 10 | > th | dose independent | rect. | 15 | 23 |
| 542 | 179.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 555 | 179.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 559 | 179.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 573 | 179.20 | radiation | 1.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 630 | 179.35 | radiation | 10.0 | 10 | > th | dose independent | sin | 23 | NA |
| 632 | 179.36 | radiation | 30.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 652 | 179.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 657 | 179.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 6 |
| 683 | 179.57 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 11 |
| 709 | 179.63 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 710 | 179.63 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 720 | 179.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 721 | 179.68 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 735 | 179.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 770 | 179.76 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 798 | 179.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 822 | 179.92 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 831 | 179.94 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 833 | 179.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 834 | 179.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 835 | 179.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 836 | 179.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 885 | 180.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 934 | 180.11 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 935 | 180.12 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 939 | 180.12 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 987 | 180.20 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 5 |