Os03g0833600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase-like protein.
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Os03g0833600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.46 | 0.469 | 9.37 | -0.966 | 0.616 | 0.975 | -0.628 | -7.85 | 0.444 | 23.6 | 24.92 | 4316 | -- | -- |
| 111.35 | 0.495 | 9.15 | 0.833 | 0.871 | 0.974 | -0.693 | -- | 0.739 | 0.339 | 14.9 | 1832 | -- | -- |
| 100.89 | 0.468 | 9.36 | -0.923 | 0.612 | 0.964 | -- | -7.77 | 0.446 | 23.3 | 24.7 | 4219 | -- | -- |
| 111.85 | 0.493 | 9.14 | 0.836 | 0.676 | 0.988 | -- | -- | 0.731 | 0.963 | 9.047 | 387 | -- | -- |
| 123.13 | 0.517 | 9.34 | -0.863 | -- | 1.04 | -- | -7.28 | 0.43 | -- | 24.17 | 4033 | -- | -- |
| 121.15 | 0.516 | 9.12 | 1.02 | 0.643 | -- | -0.685 | -- | 0.878 | 23.6 | -- | -- | -- | -- |
| 123.04 | 0.519 | 9.12 | 1.05 | 0.649 | -- | -- | -- | 0.882 | 23.3 | -- | -- | -- | -- |
| 126.83 | 0.525 | 9.15 | 0.751 | -- | 1.19 | -- | -- | 0.701 | -- | 7.219 | 841 | -- | -- |
| 128.09 | 0.527 | 9.17 | -- | 0.58 | 1.33 | -- | -- | 0.6 | 1.55 | 14.7 | 578 | -- | -- |
| 149.39 | 0.571 | 9.1 | 1.07 | -- | -- | -- | -- | 0.889 | -- | -- | -- | -- | -- |
| 152.29 | 0.577 | 9.14 | -- | 0.66 | -- | -- | -- | 0.765 | 23.4 | -- | -- | -- | -- |
| 140.07 | 0.551 | 9.17 | -- | -- | 1.49 | -- | -- | 0.579 | -- | 4.622 | 866 | -- | -- |
| 179.59 | 0.626 | 9.13 | -- | -- | -- | -- | -- | 0.77 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 2 | 95.69 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 4 | 96.16 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 5 | 96.21 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 10 | 96.61 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 11 | 96.64 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 14 | 96.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 17 | 96.81 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 18 | 96.81 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 19 | 96.86 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 20 | 96.88 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 22 | 96.88 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 24 | 96.90 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 25 | 96.90 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 26 | 96.91 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 27 | 96.91 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 33 | 96.96 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 35 | 96.98 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 38 | 97.00 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 49 | 97.05 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 50 | 97.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 74 | 97.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 76 | 97.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 12 |
| 89 | 97.28 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 109 | 97.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 115 | 97.47 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 116 | 97.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 118 | 97.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 152 | 97.61 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 177 | 97.71 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 182 | 97.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 200 | 97.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 204 | 97.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 210 | 97.80 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 259 | 97.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 308 | 98.00 | temperature | 25.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 309 | 98.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 315 | 98.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 323 | 98.02 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 326 | 98.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 333 | 98.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 337 | 98.04 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 349 | 98.06 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 350 | 98.06 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 363 | 98.10 | temperature | 25.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 369 | 98.10 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 372 | 98.11 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 404 | 98.16 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 436 | 98.21 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 16 | 20 |
| 452 | 98.24 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 477 | 98.28 | temperature | 20.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 480 | 98.28 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 489 | 98.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 526 | 98.34 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 13 |
| 557 | 98.38 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 570 | 98.39 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 7 | 18 |
| 631 | 98.45 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 648 | 98.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 737 | 98.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 745 | 98.54 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 761 | 98.55 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 841 | 98.61 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 842 | 98.61 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 873 | 98.63 | humidity | 70.0 | 43200 | < th | dose dependent | no | NA | NA |
| 934 | 98.67 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 956 | 98.69 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 977 | 98.70 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 4 | NA |