Os03g0833500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 98kDa HDM allergen.
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Os03g0833500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 98kDa HDM allergen.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.5 | 0.489 | 3.28 | 0.19 | 0.225 | 0.647 | -0.359 | 8.46 | 0.0836 | 6.49 | 0.3611 | 9 | -- | -- |
| 108.57 | 0.485 | 3.29 | 0.174 | 0.218 | 3 | -0.285 | -- | 0.0901 | 6.73 | -0.4152 | 5 | -- | -- |
| 108.27 | 0.485 | 3.28 | 0.17 | 0.225 | 0.729 | -- | 8.25 | 0.085 | 6.79 | 0.1276 | 5 | -- | -- |
| 108.75 | 0.486 | 3.29 | 0.17 | 0.218 | 3.01 | -- | -- | 0.0914 | 7.12 | -0.2165 | 5 | -- | -- |
| 110.9 | 0.49 | 3.28 | 0.187 | -- | 1.53 | -- | 5.65 | 0.0926 | -- | 0.08746 | 5 | -- | -- |
| 118.47 | 0.51 | 3.29 | 0.216 | 0.235 | -- | -0.295 | -- | 0.0773 | 6.45 | -- | -- | -- | -- |
| 118.68 | 0.51 | 3.29 | 0.212 | 0.234 | -- | -- | -- | 0.0785 | 6.66 | -- | -- | -- | -- |
| 111.17 | 0.491 | 3.29 | 0.173 | -- | 3.14 | -- | -- | 0.0902 | -- | 0.246 | 5 | -- | -- |
| 109.48 | 0.487 | 3.29 | -- | 0.218 | 3.12 | -- | -- | 0.0715 | 7.06 | 0.1681 | 5 | -- | -- |
| 121.54 | 0.515 | 3.29 | 0.218 | -- | -- | -- | -- | 0.0832 | -- | -- | -- | -- | -- |
| 119.87 | 0.512 | 3.29 | -- | 0.237 | -- | -- | -- | 0.0549 | 6.61 | -- | -- | -- | -- |
| 111.98 | 0.493 | 3.3 | -- | -- | 3.19 | -- | -- | 0.0748 | -- | 0.2167 | 5 | -- | -- |
| 122.79 | 0.517 | 3.3 | -- | -- | -- | -- | -- | 0.0591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.71 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 100.44 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 4 | 100.78 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 6 | 102.44 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 23 |
| 7 | 102.44 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 8 | 102.46 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 9 | 102.64 | wind | 3.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 11 | 103.08 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 13 | 105.64 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 15 | 105.80 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 20 | 107.21 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 21 | 107.27 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 2 | 5 |
| 22 | 107.35 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 29 | 107.60 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 39 | 107.69 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 43 | 107.74 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 48 | 107.78 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 0 | NA |
| 49 | 107.86 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 57 | 108.08 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 60 | 108.13 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 113 | 108.84 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 115 | 108.84 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 121 | 108.91 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 122 | 108.91 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 126 | 108.94 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 130 | 108.95 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 134 | 108.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 12 |
| 146 | 108.97 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 147 | 108.97 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 233 | 109.08 | precipitation | 0.1 | 10 | < th | dose independent | sin | 6 | NA |
| 240 | 109.08 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 6 | NA |
| 251 | 109.10 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 373 | 109.17 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 387 | 109.17 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 494 | 109.26 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 496 | 109.26 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 542 | 109.30 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 570 | 109.30 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 737 | 109.52 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 754 | 109.56 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 755 | 109.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 759 | 109.56 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 763 | 109.56 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 768 | 109.56 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 769 | 109.56 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 770 | 109.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 779 | 109.58 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 781 | 109.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 23 |
| 782 | 109.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 783 | 109.59 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 12 |
| 845 | 109.68 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 848 | 109.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 850 | 109.68 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 851 | 109.68 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 859 | 109.68 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 866 | 109.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 867 | 109.68 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 871 | 109.71 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 910 | 109.83 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 911 | 109.83 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 976 | 109.83 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 978 | 109.84 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 981 | 109.86 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 4 |