Os03g0833100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tasselseed2 protein (Fragment).
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Os03g0833100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Tasselseed2 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.26 | 0.675 | 4.53 | 1.93 | 2 | 1.74 | 1.33 | 2.78 | 0.0546 | 22.9 | 0.3417 | 1428 | -- | -- |
| 208.83 | 0.673 | 4.48 | 2.17 | 1.9 | 1.05 | 1.24 | -- | 0.0822 | 22.9 | 0.4601 | 1452 | -- | -- |
| 210.01 | 0.675 | 4.53 | 1.85 | 1.7 | 1.83 | -- | 3.28 | 0.0182 | 22.6 | 0.3254 | 1508 | -- | -- |
| 215 | 0.683 | 4.48 | 2.12 | 1.9 | 1.05 | -- | -- | 0.0879 | 22.8 | 0.442 | 1455 | -- | -- |
| 257.45 | 0.751 | 4.46 | 1.94 | -- | 1.35 | -- | 0.489 | -0.0182 | -- | 0.4493 | 1618 | -- | -- |
| 221.13 | 0.697 | 4.51 | 1.9 | 1.94 | -- | 1.13 | -- | -0.0384 | 22.9 | -- | -- | -- | -- |
| 226.46 | 0.705 | 4.51 | 1.85 | 1.93 | -- | -- | -- | -0.0418 | 22.8 | -- | -- | -- | -- |
| 253.48 | 0.745 | 4.46 | 1.93 | -- | 1.37 | -- | -- | -0.00603 | -- | 1.643 | 1646 | -- | -- |
| 311.43 | 0.822 | 4.53 | -- | 1.95 | 0.427 | -- | -- | -0.115 | 22.9 | 20.02 | 8775 | -- | -- |
| 457.8 | 1 | 4.46 | 1.89 | -- | -- | -- | -- | -0.0294 | -- | -- | -- | -- | -- |
| 316.94 | 0.833 | 4.56 | -- | 1.95 | -- | -- | -- | -0.248 | 22.9 | -- | -- | -- | -- |
| 337.76 | 0.859 | 4.51 | -- | -- | 1.49 | -- | -- | -0.23 | -- | 10 | 8964 | -- | -- |
| 552.34 | 1.1 | 4.51 | -- | -- | -- | -- | -- | -0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.46 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 13 |
| 2 | 202.54 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 5 | 203.02 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 13 |
| 7 | 203.42 | radiation | 1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 10 | 203.62 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 13 | 203.98 | humidity | 70 | 10 | > th | dose dependent | sin | 20 | NA |
| 25 | 205.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 29 | 205.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 31 | 205.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 32 | 205.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 39 | 205.19 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 54 | 205.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 62 | 205.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 63 | 205.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 110 | 205.70 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |
| 122 | 206.02 | humidity | 80 | 10 | > th | dose independent | rect. | 6 | 14 |
| 143 | 206.22 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 174 | 206.29 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 195 | 206.41 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 196 | 206.42 | radiation | 1 | 270 | < th | dose independent | sin | 23 | NA |
| 210 | 206.44 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 213 | 206.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 215 | 206.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 237 | 206.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 294 | 206.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 297 | 206.75 | radiation | 1 | 1440 | > th | dose independent | sin | 18 | NA |
| 309 | 206.80 | radiation | 10 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 339 | 206.88 | radiation | 40 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 384 | 206.98 | radiation | 10 | 14400 | < th | dose dependent | sin | 10 | NA |
| 390 | 207.01 | radiation | 1 | 270 | > th | dose independent | sin | 23 | NA |
| 392 | 207.01 | radiation | 1 | 270 | < th | dose dependent | sin | 23 | NA |
| 394 | 207.02 | radiation | 1 | 1440 | < th | dose independent | sin | 18 | NA |
| 401 | 207.04 | humidity | 70 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 411 | 207.12 | radiation | 40 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 428 | 207.13 | temperature | 25 | 90 | < th | dose independent | sin | 20 | NA |
| 433 | 207.14 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 453 | 207.18 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 459 | 207.22 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 538 | 207.47 | radiation | 40 | 14400 | > th | dose dependent | sin | 13 | NA |
| 552 | 207.48 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 571 | 207.52 | temperature | 25 | 30 | > th | dose independent | sin | 20 | NA |
| 684 | 207.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 754 | 207.90 | radiation | 40 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 781 | 207.93 | radiation | 1 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 842 | 207.99 | radiation | 40 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 863 | 208.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 864 | 208.01 | radiation | 40 | 14400 | > th | dose independent | sin | 13 | NA |
| 890 | 208.06 | radiation | 1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 910 | 208.10 | radiation | 40 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 915 | 208.11 | radiation | 1 | 270 | > th | dose independent | rect. | 7 | 23 |
| 921 | 208.13 | radiation | 40 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 945 | 208.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |