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Os03g0832300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.0181) R2 : 0.0666
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.217 (0.0381) R2dN8 : 0.086 R2N8 : 0.0666
σ : 0.341
deviance : 53.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.46 0.251 13.6 -0.0388 0.523 0.00998 0.065 -1.9 0.117 19.3 18.86 6504 -- --
31.43 0.263 13.5 0.49 0.513 0.179 0.0306 -- 0.258 19.6 13.17 16553 -- --
28.47 0.249 13.6 -0.0347 0.522 0.0054 -- -1.86 0.118 19.3 18.74 6749 -- --
31.43 0.263 13.5 0.489 0.513 0.178 -- -- 0.259 19.6 12.76 11672 -- --
42.91 0.305 13.6 -0.101 -- 0.0323 -- -1.96 0.085 -- 19.41 7916 -- --
31.73 0.264 13.5 0.524 0.526 -- 0.0139 -- 0.284 19.2 -- -- -- --
31.73 0.264 13.5 0.524 0.526 -- -- -- 0.284 19.2 -- -- -- --
45.49 0.316 13.5 0.476 -- 0.196 -- -- 0.243 -- 19.41 7916 -- --
32.82 0.267 13.5 -- 0.525 0.41 -- -- 0.111 19.1 11.07 42661 -- --
46.36 0.318 13.5 0.514 -- -- -- -- 0.274 -- -- -- -- --
38.97 0.292 13.5 -- 0.521 -- -- -- 0.225 19.3 -- -- -- --
47.19 0.32 13.5 -- -- 0.412 -- -- 0.0984 -- 7.768 42465 -- --
53.34 0.341 13.5 -- -- -- -- -- 0.217 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.68 wind 5.0 90 < th dose independent rect. 3 6
2 25.72 temperature 10.0 10 > th dose dependent rect. 9 18
5 25.84 wind 9.0 90 < th dose dependent rect. 3 6
11 25.99 temperature 10.0 270 > th dose dependent rect. 18 8
14 26.03 precipitation 0.1 90 < th dose independent rect. 3 6
15 26.03 precipitation 0.1 90 < th dose dependent rect. 3 6
16 26.05 temperature 30.0 90 < th dose independent rect. 3 6
17 26.07 wind 9.0 90 < th dose independent rect. 9 18
18 26.07 temperature 10.0 30 > th dose dependent rect. 20 8
19 26.08 wind 5.0 270 < th dose independent rect. 3 3
21 26.10 atmosphere 1000.0 10 > th dose dependent rect. 3 6
22 26.12 precipitation 0.1 90 < th dose independent rect. 9 18
23 26.12 precipitation 0.1 90 < th dose dependent rect. 9 18
25 26.13 humidity 60.0 90 > th dose independent rect. 3 6
29 26.15 temperature 10.0 90 > th dose independent rect. 3 6
32 26.15 atmosphere 995.0 90 > th dose independent rect. 3 6
33 26.15 atmosphere 1015.0 90 < th dose independent rect. 3 6
34 26.15 temperature 10.0 90 > th dose independent rect. 9 18
37 26.17 radiation 10.0 270 < th dose independent rect. 17 10
39 26.19 radiation 40.0 90 < th dose independent rect. 3 6
45 26.24 precipitation 0.1 270 < th dose independent rect. 3 14
47 26.24 precipitation 0.1 270 < th dose dependent rect. 3 14
53 26.28 temperature 10.0 30 > th dose dependent rect. 4 5
56 26.29 wind 9.0 270 < th dose dependent rect. 3 3
59 26.30 precipitation 0.1 10 < th dose independent rect. 9 18
61 26.30 precipitation 0.1 10 < th dose dependent rect. 9 18
62 26.31 precipitation 0.1 270 < th dose independent rect. 3 3
66 26.31 precipitation 0.1 270 < th dose dependent rect. 3 3
72 26.32 radiation 20.0 270 < th dose dependent rect. 17 10
80 26.35 atmosphere 995.0 90 > th dose independent rect. 9 18
85 26.36 humidity 50.0 270 > th dose independent rect. 17 10
86 26.36 precipitation 0.1 270 < th dose independent rect. 17 10
89 26.36 precipitation 0.1 270 < th dose dependent rect. 17 10
109 26.41 humidity 80.0 270 > th dose independent rect. 3 3
110 26.41 temperature 10.0 43200 > th dose independent rect. 10 5
113 26.42 humidity 50.0 270 > th dose independent rect. 6 21
136 26.45 wind 9.0 270 < th dose independent rect. 17 10
157 26.48 temperature 10.0 270 > th dose independent rect. 17 10
161 26.48 temperature 10.0 270 > th dose independent rect. 3 14
162 26.48 atmosphere 1015.0 270 < th dose independent rect. 3 14
178 26.50 wind 9.0 270 < th dose independent rect. 6 21
187 26.52 wind 9.0 30 < th dose independent rect. 9 5
189 26.52 precipitation 0.1 270 < th dose independent rect. 6 21
190 26.52 precipitation 0.1 270 < th dose dependent rect. 6 21
192 26.53 temperature 10.0 30 > th dose independent rect. 9 5
194 26.53 temperature 10.0 1440 > th dose independent rect. 10 5
197 26.53 atmosphere 995.0 30 > th dose independent rect. 9 5
198 26.53 atmosphere 1015.0 30 < th dose independent rect. 9 5
199 26.53 precipitation 0.1 30 < th dose independent rect. 9 5
200 26.53 temperature 10.0 30 > th dose independent rect. 14 19
201 26.53 temperature 10.0 1440 > th dose independent rect. 15 19
204 26.53 humidity 50.0 270 > th dose independent rect. 7 19
205 26.53 precipitation 0.1 30 < th dose dependent rect. 9 5
230 26.55 temperature 10.0 270 > th dose independent rect. 3 3
232 26.55 temperature 30.0 270 < th dose independent rect. 3 3
233 26.55 humidity 50.0 270 > th dose independent rect. 3 3
236 26.55 atmosphere 995.0 270 > th dose independent rect. 3 3
237 26.55 atmosphere 1015.0 270 < th dose independent rect. 3 3
238 26.55 radiation 20.0 270 < th dose independent rect. 3 3
241 26.55 humidity 50.0 30 > th dose independent rect. 9 5
244 26.55 temperature 10.0 270 > th dose independent rect. 6 21
249 26.56 temperature 10.0 30 > th dose dependent rect. 9 5
252 26.57 temperature 30.0 270 < th dose independent rect. 18 9
257 26.57 radiation 1.0 270 < th dose dependent rect. 3 2
263 26.58 atmosphere 1015.0 90 < th dose independent rect. 9 18
283 26.60 wind 1.0 30 > th dose independent rect. 9 5
284 26.60 temperature 10.0 1440 > th dose independent rect. 4 6
287 26.60 atmosphere 995.0 1440 > th dose independent rect. 4 6
288 26.60 atmosphere 1015.0 1440 < th dose independent rect. 4 6
290 26.60 temperature 10.0 1440 > th dose independent rect. 10 18
293 26.60 wind 9.0 30 < th dose independent rect. 14 19
296 26.61 radiation 1.0 30 > th dose independent rect. 9 5
300 26.61 radiation 20.0 270 < th dose dependent rect. 3 2
316 26.63 humidity 50.0 90 > th dose independent rect. 9 18
317 26.63 precipitation 0.1 30 < th dose independent rect. 14 19
320 26.63 precipitation 0.1 30 < th dose dependent rect. 14 19
321 26.64 radiation 1.0 270 < th dose independent rect. 3 2
324 26.64 wind 9.0 90 < th dose independent rect. 8 7
325 26.64 precipitation 0.1 90 < th dose independent rect. 8 7
330 26.64 precipitation 0.1 90 < th dose dependent rect. 8 7
351 26.67 humidity 50.0 270 > th dose dependent rect. 3 3
356 26.68 temperature 10.0 90 > th dose independent rect. 8 7
357 26.68 atmosphere 995.0 90 > th dose independent rect. 8 7
358 26.68 atmosphere 1015.0 90 < th dose independent rect. 8 7
360 26.68 temperature 10.0 90 > th dose independent rect. 15 17
377 26.69 atmosphere 995.0 270 > th dose independent rect. 17 10
402 26.71 wind 9.0 270 < th dose independent rect. 6 8
413 26.73 radiation 1.0 10 > th dose independent rect. 9 7
417 26.73 wind 9.0 90 < th dose independent rect. 15 17
439 26.75 temperature 10.0 270 > th dose dependent rect. 19 17
446 26.76 humidity 50.0 90 > th dose independent rect. 8 7
449 26.76 atmosphere 995.0 30 > th dose independent rect. 14 19
450 26.76 temperature 10.0 270 > th dose dependent rect. 3 3
464 26.77 wind 9.0 270 < th dose independent rect. 3 14
475 26.78 precipitation 0.1 270 < th dose independent rect. 6 8
479 26.78 precipitation 0.1 270 < th dose dependent rect. 6 8
489 26.80 humidity 50.0 270 > th dose independent rect. 6 8
490 26.80 precipitation 0.1 90 < th dose independent rect. 15 17
498 26.80 precipitation 0.1 90 < th dose dependent rect. 15 17
506 26.81 temperature 10.0 270 > th dose independent rect. 6 8
507 26.81 atmosphere 995.0 270 > th dose independent rect. 6 8
508 26.81 atmosphere 1015.0 270 < th dose independent rect. 6 8
523 26.82 atmosphere 1000.0 270 > th dose dependent rect. 3 3
547 26.84 radiation 40.0 30 < th dose independent rect. 14 19
554 26.85 radiation 40.0 90 < th dose independent rect. 15 17
561 26.85 wind 9.0 30 < th dose dependent rect. 20 8
569 26.86 temperature 10.0 270 > th dose dependent rect. 9 1
590 26.88 humidity 50.0 4320 > th dose independent rect. 4 6
606 26.90 radiation 40.0 270 < th dose dependent rect. 2 5
628 26.91 atmosphere 995.0 90 > th dose independent rect. 15 17
671 26.94 wind 9.0 90 < th dose dependent rect. 9 18
681 26.96 humidity 50.0 270 > th dose dependent rect. 2 5
693 26.98 atmosphere 1005.0 90 > th dose independent rect. 3 6
702 26.98 atmosphere 995.0 270 > th dose independent rect. 2 15
705 26.98 humidity 50.0 10 > th dose independent rect. 14 19
711 26.98 radiation 1.0 30 > th dose dependent rect. 16 17
713 26.99 radiation 1.0 270 > th dose independent rect. 9 1
717 26.99 wind 7.0 30 < th dose independent rect. 20 8
725 27.00 precipitation 0.1 30 < th dose independent rect. 20 8
731 27.00 precipitation 0.1 30 < th dose dependent rect. 20 8
733 27.01 wind 9.0 270 < th dose independent rect. 9 1
734 27.01 humidity 50.0 270 > th dose independent rect. 9 1
735 27.01 precipitation 0.1 270 < th dose independent rect. 9 1
745 27.01 precipitation 0.1 270 < th dose dependent rect. 9 1
771 27.03 temperature 10.0 270 > th dose independent rect. 9 1
772 27.03 atmosphere 995.0 270 > th dose independent rect. 9 1
773 27.03 atmosphere 1015.0 270 < th dose independent rect. 9 1
782 27.03 temperature 10.0 270 > th dose independent rect. 10 23
788 27.03 radiation 1.0 30 < th dose dependent rect. 20 8
790 27.04 wind 1.0 14400 < th dose independent rect. 22 4
791 27.04 humidity 90.0 30 < th dose independent rect. 9 5
794 27.04 temperature 10.0 30 > th dose independent rect. 20 8
795 27.04 temperature 30.0 30 < th dose independent rect. 20 8
796 27.04 humidity 50.0 30 > th dose independent rect. 20 8
799 27.04 atmosphere 995.0 30 > th dose independent rect. 20 8
800 27.04 radiation 1.0 30 < th dose independent rect. 20 8
805 27.04 temperature 10.0 30 > th dose independent rect. 4 16
807 27.04 atmosphere 1015.0 30 < th dose independent rect. 4 16
811 27.04 atmosphere 995.0 270 > th dose independent rect. 6 21
823 27.05 radiation 20.0 30 < th dose dependent sin 12 NA
848 27.08 precipitation 0.1 30 < th dose independent rect. 4 16
854 27.08 wind 9.0 270 < th dose dependent rect. 17 9
855 27.08 precipitation 0.1 30 < th dose dependent rect. 4 16
890 27.11 wind 9.0 270 < th dose dependent rect. 7 6
922 27.14 temperature 10.0 270 > th dose dependent rect. 8 3
929 27.15 wind 9.0 30 < th dose independent rect. 4 16
939 27.16 wind 1.0 270 > th dose independent rect. 9 1
940 27.16 atmosphere 1005.0 270 > th dose independent rect. 3 3
957 27.16 radiation 20.0 4320 < th dose independent rect. 17 16
976 27.18 radiation 20.0 4320 < th dose independent rect. 6 3
982 27.18 radiation 20.0 4320 < th dose independent rect. 23 10
995 27.19 radiation 20.0 4320 < th dose independent rect. 3 6