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Os03g0831900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, U1-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0122) R2 : 0.617
β1 : -1.21 (0.0447) R2dD : 0.635 R2D : 0.555
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.194 (0.0261) R2dN8 : 0.0623 R2N8 : -0.0184
σ : 0.229
deviance : 24.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.94 0.204 12 -1.14 0.22 -0.234 -0.0771 -1.05 -0.221 7.04 19.69 4431 -- --
19.44 0.205 12 -1.21 0.221 -0.198 -0.227 -- -0.25 7.23 30.41 13023 -- --
18.95 0.203 12 -1.14 0.22 -0.233 -- -1.05 -0.221 6.99 19.97 4480 -- --
19.23 0.204 12 -1.17 0.2 -0.227 -- -- -0.274 7.08 21.92 11674 -- --
21.5 0.216 12 -1.13 -- -0.238 -- -1.09 -0.219 -- 19.7 4427 -- --
21.38 0.217 11.9 -1.21 0.224 -- -0.0554 -- -0.198 7.05 -- -- -- --
21.38 0.217 11.9 -1.21 0.224 -- -- -- -0.198 7.05 -- -- -- --
21.76 0.217 12 -1.2 -- -0.255 -- -- -0.278 -- 21.64 11669 -- --
33.56 0.27 11.9 -- 0.216 -0.819 -- -- 0.134 6.51 59.96 47520 -- --
24.03 0.229 12 -1.21 -- -- -- -- -0.194 -- -- -- -- --
60.03 0.362 11.9 -- 0.212 -- -- -- -0.0631 7.41 -- -- -- --
36.03 0.28 11.9 -- -- -0.818 -- -- 0.136 -- 59.97 47437 -- --
62.43 0.369 11.9 -- -- -- -- -- -0.06 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.41 temperature 25.0 270 > th dose dependent rect. 19 15
2 17.52 temperature 25.0 270 > th dose dependent rect. 18 17
3 17.57 temperature 10.0 270 > th dose dependent rect. 17 20
7 17.71 atmosphere 1015.0 90 < th dose dependent rect. 19 18
8 17.78 temperature 30.0 14400 < th dose independent rect. 1 8
9 17.79 temperature 30.0 14400 > th dose independent rect. 8 1
15 17.79 temperature 30.0 14400 < th dose independent rect. 3 6
26 17.79 temperature 30.0 14400 > th dose dependent rect. 8 1
41 17.81 temperature 30.0 14400 < th dose independent rect. 6 3
55 17.92 atmosphere 1015.0 270 < th dose dependent rect. 17 19
56 17.92 temperature 15.0 90 > th dose dependent rect. 19 20
72 18.03 temperature 25.0 270 > th dose dependent sin 9 NA
89 18.13 radiation 10.0 43200 < th dose dependent rect. 19 6
93 18.14 radiation 10.0 43200 < th dose dependent rect. 19 8
98 18.15 atmosphere 995.0 90 > th dose dependent rect. 23 9
116 18.26 wind 1.0 43200 < th dose independent rect. 2 2
120 18.27 radiation 30.0 90 < th dose independent rect. 23 20
123 18.27 atmosphere 995.0 90 > th dose dependent rect. 15 16
126 18.28 wind 1.0 43200 > th dose independent rect. 2 2
130 18.30 radiation 10.0 4320 > th dose dependent rect. 15 2
147 18.31 atmosphere 995.0 90 > th dose dependent rect. 23 20
150 18.33 radiation 30.0 4320 < th dose independent rect. 15 1
154 18.34 wind 1.0 43200 < th dose dependent rect. 2 2
171 18.35 radiation 30.0 4320 > th dose independent rect. 15 1
172 18.35 radiation 40.0 14400 > th dose dependent rect. 12 1
174 18.35 atmosphere 995.0 270 > th dose dependent rect. 13 17
204 18.36 precipitation 0.1 43200 > th dose dependent rect. 17 1
228 18.41 precipitation 0.1 43200 > th dose independent rect. 17 1
229 18.41 precipitation 0.1 43200 < th dose independent rect. 17 1
237 18.41 precipitation 0.1 43200 < th dose dependent rect. 17 1
238 18.41 radiation 40.0 4320 < th dose dependent rect. 15 2
239 18.41 precipitation 0.1 43200 > th dose dependent rect. 14 4
241 18.41 precipitation 0.1 43200 > th dose dependent rect. 12 6
251 18.42 radiation 30.0 4320 < th dose independent rect. 15 5
260 18.43 radiation 30.0 4320 < th dose independent rect. 15 16
272 18.44 radiation 30.0 4320 < th dose independent rect. 15 14
300 18.46 radiation 40.0 4320 < th dose dependent rect. 15 5
301 18.46 precipitation 0.1 43200 > th dose dependent rect. 17 5
309 18.47 humidity 80.0 14400 > th dose independent rect. 17 14
312 18.47 wind 3.0 43200 > th dose dependent rect. 8 1
324 18.47 atmosphere 995.0 10 > th dose dependent rect. 15 17
333 18.48 wind 9.0 43200 > th dose dependent rect. 20 1
349 18.48 radiation 40.0 4320 < th dose dependent rect. 15 11
401 18.50 humidity 90.0 4320 > th dose dependent rect. 6 1
411 18.51 radiation 10.0 4320 > th dose independent rect. 16 1
447 18.52 radiation 1.0 14400 > th dose dependent rect. 12 1
458 18.53 wind 9.0 43200 < th dose independent rect. 20 7
469 18.54 radiation 40.0 14400 < th dose independent rect. 12 1
471 18.54 wind 9.0 43200 < th dose independent rect. 20 4
497 18.55 humidity 80.0 14400 < th dose independent rect. 17 14
510 18.56 radiation 40.0 14400 > th dose independent rect. 12 1
521 18.56 temperature 25.0 270 > th dose dependent rect. 1 9
533 18.56 atmosphere 995.0 10 > th dose dependent rect. 23 21
629 18.61 atmosphere 1000.0 90 > th dose independent rect. 23 20
631 18.61 precipitation 0.1 43200 > th dose dependent sin 19 NA
654 18.62 humidity 80.0 14400 < th dose independent rect. 18 10
659 18.62 temperature 25.0 270 > th dose dependent rect. 9 1
660 18.62 temperature 25.0 270 > th dose dependent rect. 7 3
685 18.63 radiation 10.0 14400 < th dose independent rect. 12 19
686 18.63 radiation 1.0 43200 < th dose dependent rect. 1 1
704 18.64 humidity 80.0 14400 > th dose independent sin 13 NA
741 18.66 atmosphere 995.0 43200 > th dose independent rect. 18 1
769 18.67 radiation 10.0 14400 < th dose independent rect. 6 1
771 18.67 wind 9.0 43200 > th dose independent rect. 20 4
804 18.68 radiation 20.0 4320 < th dose independent sin 14 NA
812 18.68 wind 9.0 43200 > th dose independent rect. 20 7
814 18.68 radiation 40.0 14400 < th dose dependent rect. 12 1
835 18.69 atmosphere 995.0 43200 < th dose independent rect. 17 1
847 18.69 atmosphere 995.0 43200 < th dose dependent rect. 17 1
859 18.69 humidity 90.0 14400 < th dose dependent rect. 20 6
868 18.69 precipitation 0.1 43200 > th dose dependent rect. 17 15
878 18.70 wind 5.0 43200 < th dose independent rect. 8 1
888 18.70 radiation 10.0 14400 > th dose independent rect. 12 4
889 18.70 radiation 10.0 14400 < th dose independent rect. 12 4
906 18.70 atmosphere 1015.0 270 < th dose dependent rect. 17 6
913 18.70 atmosphere 995.0 10 > th dose dependent rect. 23 9
937 18.71 humidity 80.0 14400 < th dose independent sin 13 NA
941 18.71 radiation 10.0 14400 > th dose independent rect. 12 2
948 18.71 radiation 10.0 14400 < th dose independent rect. 12 7
955 18.71 radiation 10.0 14400 < th dose independent rect. 12 15
960 18.71 radiation 10.0 14400 > th dose independent rect. 12 19
981 18.72 wind 9.0 43200 > th dose independent rect. 20 1
982 18.72 wind 9.0 43200 < th dose independent rect. 20 1
983 18.72 precipitation 0.1 43200 < th dose independent rect. 20 1