Os03g0830800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os03g0830800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 237.54 | 0.724 | 3.14 | -0.297 | 0.694 | 0.839 | -2.27 | -1.35 | 0.28 | 1.22 | 24.2 | 1037 | -- | -- |
| 241.75 | 0.724 | 3.16 | -0.707 | 0.661 | 0.793 | -1.94 | -- | 0.239 | 0.828 | 23.91 | 1000 | -- | -- |
| 256.05 | 0.751 | 3.15 | -0.299 | 0.326 | 0.506 | -- | -1.42 | 0.206 | 1.3 | 23.9 | 1046 | -- | -- |
| 257.22 | 0.747 | 3.19 | -0.671 | 0.673 | 0.747 | -- | -- | 0.147 | 1.29 | 24.1 | 1022 | -- | -- |
| 261.96 | 0.758 | 3.13 | -0.243 | -- | 0.595 | -- | -1.44 | 0.254 | -- | 23.9 | 1046 | -- | -- |
| 265.32 | 0.764 | 3.26 | -1.05 | 0.496 | -- | -2.08 | -- | -0.165 | 1.39 | -- | -- | -- | -- |
| 282.85 | 0.788 | 3.25 | -0.982 | 0.499 | -- | -- | -- | -0.154 | 1.5 | -- | -- | -- | -- |
| 272.62 | 0.772 | 3.19 | -0.718 | -- | 0.569 | -- | -- | 0.102 | -- | 23.7 | 1706 | -- | -- |
| 269.35 | 0.764 | 3.19 | -- | 0.665 | 0.85 | -- | -- | 0.215 | 1.12 | 23.9 | 1041 | -- | -- |
| 298.09 | 0.807 | 3.24 | -0.962 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 308.24 | 0.821 | 3.23 | -- | 0.481 | -- | -- | -- | -0.0442 | 1.43 | -- | -- | -- | -- |
| 285.44 | 0.789 | 3.16 | -- | -- | 0.666 | -- | -- | 0.219 | -- | 23.7 | 1706 | -- | -- |
| 322.49 | 0.838 | 3.22 | -- | -- | -- | -- | -- | -0.0361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 232.60 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 2 | 232.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 3 | 232.72 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 4 | 233.05 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 6 | 233.05 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 8 | 233.22 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 10 | 233.30 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 25 | 233.68 | wind | 5.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 28 | 233.70 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 36 | 233.81 | wind | 5.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 44 | 233.95 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 45 | 233.96 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 60 | 234.09 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 61 | 234.09 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 5 |
| 62 | 234.09 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 68 | 234.14 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 78 | 234.25 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 83 | 234.32 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 127 | 234.69 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 158 | 235.00 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 172 | 235.11 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 177 | 235.22 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 179 | 235.24 | wind | 5.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 193 | 235.35 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 242 | 235.65 | wind | 5.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 251 | 235.69 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 273 | 235.82 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 279 | 235.87 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 304 | 236.02 | humidity | 80.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 306 | 236.04 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 307 | 236.05 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 313 | 236.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 328 | 236.15 | wind | 3.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 375 | 236.33 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 401 | 236.46 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 13 | 9 |
| 419 | 236.54 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 422 | 236.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 430 | 236.58 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 10 |
| 448 | 236.66 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 465 | 236.71 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 525 | 236.93 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 558 | 237.04 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 612 | 237.23 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 632 | 237.33 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 655 | 237.39 | humidity | 80.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 703 | 237.51 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 737 | 237.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 750 | 237.63 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 752 | 237.63 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 12 | 18 |
| 789 | 237.75 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 813 | 237.81 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 820 | 237.83 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 829 | 237.84 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 831 | 237.85 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 834 | 237.86 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 851 | 237.90 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 856 | 237.92 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 860 | 237.93 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 915 | 238.01 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 943 | 238.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 964 | 238.13 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 16 |