Os03g0830600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os03g0830600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.62 | 0.347 | 2.88 | 0.184 | 0.0379 | 2.52 | 0.0148 | 5.11 | 0.0148 | 5.06 | 17 | 762 | -- | -- |
| 59.42 | 0.362 | 2.85 | 0.154 | 0.0418 | 0.0862 | 0.151 | -- | 0.0084 | 10.2 | 17 | 762 | -- | -- |
| 54.59 | 0.344 | 2.88 | 0.18 | 0.0343 | 2.58 | -- | 5.21 | 0.014 | 5.26 | 16.9 | 666 | -- | -- |
| 58.18 | 0.355 | 2.84 | 0.235 | 0.0242 | 0.316 | -- | -- | 0.0641 | 22 | 30.8 | 767 | -- | -- |
| 54.6 | 0.344 | 2.88 | 0.183 | -- | 2.88 | -- | 5.87 | 0.0133 | -- | 17.03 | 504 | -- | -- |
| 59.45 | 0.361 | 2.85 | 0.148 | 0.0416 | -- | 0.153 | -- | 0.0067 | 10.2 | -- | -- | -- | -- |
| 59.52 | 0.361 | 2.85 | 0.153 | 0.0451 | -- | -- | -- | 0.00664 | 8.79 | -- | -- | -- | -- |
| 58.21 | 0.355 | 2.84 | 0.236 | -- | 0.299 | -- | -- | 0.0553 | -- | 35.44 | 925 | -- | -- |
| 59.48 | 0.359 | 2.85 | -- | 0.0038 | 0.208 | -- | -- | 0.019 | 22.3 | 31.09 | 633 | -- | -- |
| 59.64 | 0.361 | 2.85 | 0.153 | -- | -- | -- | -- | 0.00698 | -- | -- | -- | -- | -- |
| 60.14 | 0.363 | 2.86 | -- | 0.0456 | -- | -- | -- | -0.0104 | 8.54 | -- | -- | -- | -- |
| 59.47 | 0.359 | 2.85 | -- | -- | 0.208 | -- | -- | 0.0226 | -- | 30.55 | 611 | -- | -- |
| 60.26 | 0.362 | 2.86 | -- | -- | -- | -- | -- | -0.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.86 | wind | 1 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 2 | 52.05 | wind | 1 | 270 | < th | dose independent | rect. | 7 | 3 |
| 3 | 52.10 | wind | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 74 | 54.19 | wind | 1 | 720 | < th | dose independent | rect. | 3 | 7 |
| 83 | 54.25 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 4 |
| 88 | 54.27 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 89 | 54.27 | temperature | 20 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 92 | 54.28 | temperature | 20 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 99 | 54.31 | wind | 1 | 720 | > th | dose independent | rect. | 5 | 8 |
| 103 | 54.33 | temperature | 20 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 104 | 54.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 106 | 54.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 119 | 54.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 162 | 54.58 | wind | 9 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 195 | 54.58 | wind | 9 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 229 | 54.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 247 | 54.71 | wind | 1 | 720 | > th | dose independent | rect. | 2 | 7 |
| 270 | 54.83 | wind | 1 | 720 | > th | dose independent | sin | 3 | NA |
| 283 | 54.87 | wind | 1 | 720 | < th | dose dependent | sin | 2 | NA |
| 296 | 54.91 | wind | 1 | 720 | < th | dose independent | sin | 3 | NA |
| 307 | 54.94 | humidity | 90 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 311 | 54.95 | humidity | 90 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 314 | 54.98 | humidity | 90 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 365 | 55.20 | wind | 3 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 390 | 55.28 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 394 | 55.28 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 427 | 55.31 | temperature | 20 | 90 | < th | dose independent | rect. | 9 | 10 |
| 432 | 55.32 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 1 |
| 435 | 55.32 | temperature | 20 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 452 | 55.33 | wind | 1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 480 | 55.35 | wind | 1 | 720 | > th | dose independent | rect. | 2 | 15 |
| 489 | 55.36 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 544 | 55.41 | temperature | 20 | 1440 | < th | dose dependent | sin | 21 | NA |
| 602 | 55.49 | temperature | 20 | 30 | < th | dose dependent | rect. | 9 | 11 |
| 639 | 55.54 | wind | 1 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 775 | 55.74 | wind | 1 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 875 | 55.84 | wind | 1 | 720 | > th | dose independent | rect. | 5 | 4 |
| 882 | 55.84 | wind | 3 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 893 | 55.86 | wind | 1 | 720 | > th | dose independent | rect. | 1 | 21 |
| 895 | 55.87 | wind | 1 | 720 | > th | dose independent | rect. | 20 | 17 |
| 907 | 55.89 | wind | 3 | 10 | < th | dose independent | rect. | 9 | 4 |
| 930 | 55.93 | wind | 9 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 961 | 55.98 | wind | 9 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 983 | 56.00 | temperature | 20 | 720 | < th | dose dependent | sin | 0 | NA |