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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0829600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.1 (0.0245) R2 : 0.00266
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0567 (0.0515) R2dN8 : 0.00343 R2N8 : 0.00266
σ : 0.461
deviance : 97.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.06 0.456 3.1 0.00391 0.292 -0.218 -0.511 0.0398 0.0623 1.93 9.675 11 -- --
94.06 0.452 3.1 0.0019 0.29 -0.216 -0.473 -- 0.062 1.97 9.633 11 -- --
94.59 0.453 3.11 -0.0125 0.237 -0.171 -- -0.182 0.0611 2.15 9.738 10 -- --
94.92 0.454 3.1 0.0166 0.295 -0.223 -- -- 0.0648 1.85 9.639 11 -- --
96.61 0.458 3.1 -0.0123 -- -0.0475 -- -0.286 0.0567 -- 9.83 10 -- --
95.77 0.459 3.1 -0.00612 0.125 -- -0.518 -- 0.0512 3.92 -- -- -- --
96.42 0.46 3.1 0.0011 0.134 -- -- -- 0.054 5.28 -- -- -- --
97.09 0.459 3.1 0.0013 -- -0.0522 -- -- 0.0587 -- 10.07 10 -- --
94.93 0.454 3.1 -- 0.295 -0.222 -- -- 0.063 1.86 9.62 11 -- --
97.36 0.461 3.1 0.00574 -- -- -- -- 0.0574 -- -- -- -- --
96.42 0.459 3.1 -- 0.134 -- -- -- 0.0539 5.28 -- -- -- --
97.09 0.459 3.1 -- -- -0.0525 -- -- 0.0584 -- 10.07 10 -- --
97.36 0.461 3.1 -- -- -- -- -- 0.0567 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.88 wind 1.0 30 < th dose dependent rect. 23 1
15 86.75 wind 9.0 1440 < th dose independent rect. 23 1
16 86.75 temperature 10.0 1440 > th dose independent rect. 23 1
19 86.75 temperature 30.0 1440 < th dose independent rect. 23 1
23 86.75 humidity 50.0 1440 > th dose independent rect. 23 1
33 86.75 atmosphere 995.0 1440 > th dose independent rect. 23 1
34 86.75 radiation 1.0 1440 < th dose independent rect. 23 1
54 86.75 temperature 10.0 1440 > th dose independent rect. 24 23
57 86.75 radiation 1.0 1440 < th dose dependent rect. 23 1
62 86.76 humidity 90.0 30 < th dose independent rect. 22 1
63 86.77 wind 1.0 270 < th dose dependent rect. 21 2
66 86.85 atmosphere 1005.0 30 > th dose dependent rect. 22 1
67 86.88 temperature 25.0 30 > th dose independent rect. 22 1
69 86.91 atmosphere 1005.0 30 > th dose independent rect. 22 1
70 86.91 temperature 20.0 30 > th dose dependent rect. 22 1
71 86.91 humidity 90.0 30 < th dose dependent rect. 22 1
77 86.98 wind 1.0 30 > th dose independent rect. 22 1
78 86.98 precipitation 0.1 30 < th dose independent rect. 22 1
79 86.98 precipitation 0.1 30 < th dose dependent rect. 22 1
82 87.02 wind 7.0 30 < th dose independent rect. 22 1
84 87.02 temperature 10.0 30 > th dose independent rect. 22 1
86 87.02 temperature 30.0 30 < th dose independent rect. 22 1
87 87.02 humidity 50.0 30 > th dose independent rect. 22 1
91 87.02 atmosphere 1010.0 30 < th dose independent rect. 22 1
93 87.02 radiation 1.0 30 < th dose independent rect. 22 1
98 87.02 temperature 10.0 30 > th dose independent rect. 23 23
99 87.02 radiation 1.0 30 < th dose dependent rect. 22 1
105 87.05 wind 9.0 30 < th dose dependent rect. 22 1
109 87.11 wind 1.0 30 > th dose dependent rect. 22 1
110 87.11 humidity 50.0 30 > th dose dependent rect. 22 1
117 87.36 atmosphere 1015.0 30 < th dose dependent rect. 22 1
120 87.50 temperature 30.0 30 < th dose dependent rect. 22 1
133 87.99 wind 1.0 270 < th dose independent rect. 21 2
137 88.12 wind 9.0 30 < th dose independent rect. 23 23
170 88.45 wind 3.0 90 < th dose independent rect. 2 1
188 88.91 wind 5.0 90 < th dose dependent rect. 2 1
202 89.32 atmosphere 1015.0 720 < th dose independent rect. 3 8
207 89.44 wind 9.0 720 < th dose independent rect. 3 8
220 89.66 temperature 10.0 720 > th dose independent rect. 3 8
221 89.66 atmosphere 995.0 720 > th dose independent rect. 3 8
222 89.66 temperature 10.0 720 > th dose independent rect. 11 16
223 89.72 humidity 60.0 90 > th dose dependent rect. 2 1
224 89.73 temperature 10.0 720 > th dose independent rect. 15 8
225 89.73 temperature 10.0 720 > th dose independent rect. 23 16
227 89.73 atmosphere 995.0 90 > th dose dependent rect. 2 1
228 89.77 radiation 40.0 720 < th dose independent rect. 15 8
238 89.88 temperature 10.0 90 > th dose independent rect. 2 1
240 89.88 temperature 30.0 90 < th dose independent rect. 2 1
241 89.88 humidity 50.0 90 > th dose independent rect. 2 1
244 89.88 atmosphere 995.0 90 > th dose independent rect. 2 1
245 89.88 atmosphere 1010.0 90 < th dose independent rect. 2 1
247 89.88 radiation 1.0 90 < th dose independent rect. 2 1
252 89.88 precipitation 0.1 90 < th dose independent rect. 2 1
253 89.88 temperature 10.0 90 > th dose independent rect. 3 23
254 89.88 radiation 1.0 90 < th dose dependent rect. 2 1
259 89.88 precipitation 0.1 90 < th dose dependent rect. 2 1
260 89.90 humidity 50.0 720 > th dose independent rect. 3 8
265 89.99 precipitation 0.1 720 < th dose independent rect. 15 8
266 89.99 temperature 20.0 90 < th dose dependent rect. 2 1
267 89.99 precipitation 0.1 720 < th dose dependent rect. 15 8
269 90.02 precipitation 0.1 720 < th dose independent rect. 3 8
270 90.02 precipitation 0.1 720 < th dose dependent rect. 3 8
274 90.10 atmosphere 995.0 90 > th dose independent rect. 3 23
275 90.13 temperature 30.0 90 < th dose dependent rect. 2 1
276 90.15 radiation 1.0 43200 < th dose dependent rect. 3 1
277 90.16 precipitation 0.1 720 < th dose independent rect. 23 16
278 90.16 precipitation 0.1 720 < th dose dependent rect. 23 16
282 90.26 atmosphere 995.0 720 > th dose independent rect. 23 16
285 90.29 wind 1.0 90 > th dose independent rect. 2 1
286 90.29 wind 9.0 90 < th dose independent rect. 3 23
287 90.29 temperature 20.0 10 > th dose dependent rect. 22 5
291 90.37 precipitation 0.1 90 < th dose independent rect. 3 23
292 90.37 precipitation 0.1 90 < th dose dependent rect. 3 23
293 90.41 temperature 10.0 90 > th dose dependent rect. 2 1
295 90.42 temperature 20.0 30 > th dose dependent rect. 2 1
332 90.61 wind 9.0 1440 < th dose independent rect. 3 1
333 90.61 temperature 10.0 1440 > th dose independent rect. 3 1
336 90.61 temperature 30.0 1440 < th dose independent rect. 3 1
340 90.61 humidity 50.0 1440 > th dose independent rect. 3 1
349 90.61 atmosphere 995.0 1440 > th dose independent rect. 3 1
350 90.61 radiation 1.0 1440 < th dose independent rect. 3 1
370 90.61 temperature 10.0 1440 > th dose independent rect. 4 23
419 90.72 precipitation 0.1 720 < th dose independent rect. 11 16
420 90.72 precipitation 0.1 720 < th dose dependent rect. 11 16
427 90.78 atmosphere 1015.0 90 < th dose dependent rect. 2 1
429 90.82 wind 9.0 720 < th dose independent rect. 15 8
442 90.96 wind 1.0 30 < th dose dependent sin 18 NA
443 90.98 atmosphere 995.0 720 > th dose independent rect. 15 8
444 90.99 atmosphere 995.0 720 > th dose independent rect. 11 16
453 91.06 humidity 90.0 30 < th dose independent rect. 8 1
457 91.10 radiation 40.0 30 < th dose independent rect. 8 1
459 91.11 wind 7.0 30 < th dose independent rect. 8 1
461 91.11 temperature 10.0 30 > th dose independent rect. 8 1
463 91.11 temperature 30.0 30 < th dose independent rect. 8 1
464 91.11 humidity 50.0 30 > th dose independent rect. 8 1
466 91.11 atmosphere 995.0 30 > th dose independent rect. 8 1
467 91.11 atmosphere 1010.0 30 < th dose independent rect. 8 1
469 91.11 radiation 1.0 30 > th dose independent rect. 8 1
470 91.11 precipitation 0.1 30 < th dose independent rect. 8 1
471 91.11 temperature 10.0 30 > th dose independent rect. 9 23
473 91.11 precipitation 0.1 30 < th dose dependent rect. 8 1
474 91.12 humidity 90.0 30 < th dose dependent rect. 8 1
475 91.13 wind 3.0 30 > th dose independent rect. 8 1
479 91.13 wind 1.0 30 > th dose dependent rect. 8 1
480 91.13 wind 9.0 30 < th dose dependent rect. 8 1
482 91.14 temperature 10.0 30 > th dose dependent rect. 8 1
483 91.14 radiation 1.0 30 > th dose dependent rect. 8 1
491 91.16 atmosphere 995.0 30 > th dose dependent rect. 8 1
498 91.18 atmosphere 1015.0 30 < th dose dependent rect. 8 1
505 91.20 radiation 40.0 30 < th dose dependent rect. 8 1
506 91.20 temperature 20.0 10 > th dose dependent rect. 20 7
509 91.21 atmosphere 995.0 30 > th dose independent rect. 23 23
511 91.21 humidity 50.0 30 > th dose dependent rect. 8 1
534 91.29 wind 1.0 30 < th dose independent rect. 23 4
554 91.35 temperature 10.0 1440 > th dose independent rect. 9 1
558 91.35 atmosphere 995.0 1440 > th dose independent rect. 9 1
561 91.35 atmosphere 1015.0 1440 < th dose independent rect. 9 1
562 91.35 temperature 10.0 1440 > th dose independent rect. 10 23
582 91.40 radiation 10.0 30 < th dose independent rect. 4 22
639 91.49 temperature 30.0 30 < th dose dependent rect. 8 1
645 91.51 wind 1.0 30 > th dose independent rect. 4 22
665 91.53 wind 1.0 30 < th dose independent rect. 7 20
705 91.58 wind 1.0 30 < th dose independent rect. 9 18
714 91.61 temperature 25.0 270 > th dose independent rect. 20 1
841 91.85 wind 9.0 720 < th dose independent rect. 23 16
858 91.91 wind 1.0 30 > th dose independent rect. 23 23
865 91.94 precipitation 0.1 30 < th dose independent rect. 23 23
869 91.94 precipitation 0.1 30 < th dose dependent rect. 23 23
880 91.97 radiation 10.0 30 < th dose independent rect. 23 23
892 92.01 temperature 20.0 90 > th dose independent rect. 3 4
899 92.04 wind 9.0 720 < th dose independent rect. 11 16
919 92.10 temperature 10.0 90 > th dose dependent rect. 23 8
927 92.15 temperature 25.0 270 > th dose independent rect. 19 8
944 92.21 precipitation 0.1 1440 < th dose independent rect. 23 1
946 92.21 precipitation 0.1 1440 < th dose dependent rect. 23 1
954 92.23 temperature 20.0 30 > th dose dependent rect. 3 4
969 92.27 temperature 20.0 270 > th dose dependent rect. 19 5
982 92.30 wind 9.0 1440 < th dose independent rect. 24 8
990 92.31 radiation 20.0 10 < th dose dependent rect. 4 22
991 92.31 radiation 20.0 30 < th dose dependent rect. 23 23
999 92.34 wind 7.0 4320 < th dose independent rect. 5 3