Os03g0829000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Fumarylacetoacetate (FAA) hydrolase family protein.
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Os03g0829000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Fumarylacetoacetate (FAA) hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.67 | 0.252 | 7.28 | 0.355 | 0.442 | -1.02 | 0.0325 | -0.0355 | 0.0332 | 11.3 | 24.4 | 1138 | -- | -- |
| 28.66 | 0.249 | 7.28 | 0.349 | 0.44 | -1.03 | 0.0226 | -- | 0.036 | 11.3 | 24.1 | 1135 | -- | -- |
| 28.66 | 0.249 | 7.28 | 0.357 | 0.443 | -1.03 | -- | -0.0435 | 0.0377 | 11.3 | 24.15 | 1129 | -- | -- |
| 28.66 | 0.249 | 7.28 | 0.35 | 0.44 | -1.03 | -- | -- | 0.0364 | 11.3 | 24.1 | 1135 | -- | -- |
| 38.26 | 0.288 | 7.29 | 0.348 | -- | -0.983 | -- | 0.0325 | 0.0316 | -- | 24.8 | 1513 | -- | -- |
| 42.78 | 0.307 | 7.24 | 0.648 | 0.363 | -- | 0.0219 | -- | 0.236 | 10.9 | -- | -- | -- | -- |
| 42.78 | 0.306 | 7.24 | 0.648 | 0.363 | -- | -- | -- | 0.236 | 10.9 | -- | -- | -- | -- |
| 38.25 | 0.288 | 7.29 | 0.342 | -- | -0.983 | -- | -- | 0.0317 | -- | 24.7 | 1512 | -- | -- |
| 31.4 | 0.261 | 7.29 | -- | 0.439 | -1.21 | -- | -- | -0.0302 | 11.3 | 24 | 1174 | -- | -- |
| 50.95 | 0.334 | 7.24 | 0.641 | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
| 53.87 | 0.343 | 7.25 | -- | 0.358 | -- | -- | -- | 0.164 | 10.8 | -- | -- | -- | -- |
| 40.84 | 0.298 | 7.31 | -- | -- | -1.17 | -- | -- | -0.0349 | -- | 24.44 | 1520 | -- | -- |
| 61.78 | 0.367 | 7.26 | -- | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 18 |
| 3 | 27.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 4 | 27.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 6 | 27.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 21 | 27.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 29 | 28.04 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 33 | 28.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 73 | 28.45 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 122 | 28.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 131 | 28.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 132 | 28.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 151 | 29.00 | temperature | 15 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 169 | 29.06 | temperature | 25 | 1440 | < th | dose dependent | sin | 19 | NA |
| 188 | 29.13 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 365 | 29.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 385 | 29.55 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 449 | 29.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 460 | 29.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 633 | 29.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 670 | 30.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 709 | 30.08 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 975 | 30.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 2 |