Os03g0828800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os03g0828800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.46 | 0.34 | 10.4 | 0.74 | 0.899 | -0.217 | -0.495 | 2.77 | 0.294 | 0.647 | 15.25 | 4282 | -- | -- |
| 60.25 | 0.362 | 10.5 | 0.187 | 0.909 | -0.302 | -0.456 | -- | 0.171 | 0.715 | 14.19 | 21166 | -- | -- |
| 53.4 | 0.34 | 10.4 | 0.749 | 0.894 | -0.211 | -- | 2.73 | 0.294 | 0.675 | 15.2 | 4428 | -- | -- |
| 60.14 | 0.361 | 10.5 | 0.178 | 0.915 | -0.374 | -- | -- | 0.177 | 0.746 | 11.59 | 10058 | -- | -- |
| 87.62 | 0.438 | 10.4 | 0.538 | -- | -1.16 | -- | 2.31 | 0.322 | -- | 15.87 | 5924 | -- | -- |
| 61.68 | 0.368 | 10.5 | -0.0615 | 0.893 | -- | -0.456 | -- | 0.0522 | 0.619 | -- | -- | -- | -- |
| 62.56 | 0.37 | 10.5 | -0.0446 | 0.895 | -- | -- | -- | 0.0542 | 0.679 | -- | -- | -- | -- |
| 92.64 | 0.45 | 10.4 | 0.198 | -- | -1.1 | -- | -- | 0.227 | -- | 15.87 | 5924 | -- | -- |
| 60.67 | 0.363 | 10.5 | -- | 0.91 | -0.276 | -- | -- | 0.127 | 0.697 | 11.02 | 9949 | -- | -- |
| 112.7 | 0.496 | 10.5 | -0.0126 | -- | -- | -- | -- | 0.07 | -- | -- | -- | -- | -- |
| 62.61 | 0.37 | 10.5 | -- | 0.894 | -- | -- | -- | 0.0591 | 0.677 | -- | -- | -- | -- |
| 93.61 | 0.452 | 10.5 | -- | -- | -1.04 | -- | -- | 0.198 | -- | 15.87 | 5924 | -- | -- |
| 112.7 | 0.496 | 10.5 | -- | -- | -- | -- | -- | 0.0714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.02 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 5 | 51.17 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 7 | 51.18 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 9 | 51.19 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 10 | 51.20 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 30 | 51.40 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 44 | 51.45 | humidity | 80 | 43200 | > th | dose independent | sin | 12 | NA |
| 45 | 51.45 | humidity | 80 | 43200 | < th | dose independent | sin | 12 | NA |
| 64 | 51.50 | humidity | 80 | 43200 | < th | dose dependent | sin | 11 | NA |
| 81 | 51.54 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 122 | 51.68 | temperature | 25 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 137 | 51.71 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 148 | 51.75 | temperature | 15 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 158 | 51.77 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 170 | 51.77 | temperature | 30 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 175 | 51.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 186 | 51.79 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 214 | 51.81 | temperature | 25 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 221 | 51.81 | temperature | 25 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 259 | 51.83 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 266 | 51.83 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 296 | 51.84 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 411 | 51.86 | temperature | 10 | 43200 | > th | dose dependent | sin | 10 | NA |
| 416 | 51.86 | temperature | 30 | 43200 | < th | dose dependent | sin | 11 | NA |
| 655 | 51.89 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 874 | 51.90 | temperature | 10 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 891 | 51.91 | temperature | 10 | 43200 | > th | dose dependent | no | NA | NA |
| 955 | 51.91 | temperature | 10 | 43200 | > th | dose dependent | rect. | 10 | 18 |
| 964 | 51.91 | temperature | 10 | 43200 | > th | dose dependent | rect. | 3 | 20 |
| 965 | 51.91 | temperature | 10 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 974 | 51.91 | temperature | 10 | 43200 | > th | dose dependent | rect. | 1 | 21 |