Os03g0827600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfated surface glycoprotein 185 precursor (SSG 185).
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Os03g0827600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfated surface glycoprotein 185 precursor (SSG 185).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.91 | 0.199 | 12.2 | 0.417 | 0.4 | -0.629 | 0.446 | 0.678 | 0.201 | 1.53 | 25.06 | 12 | -- | -- |
| 18.04 | 0.199 | 12.2 | 0.335 | 0.403 | -0.569 | 0.362 | -- | 0.187 | 1.61 | 24.65 | 17 | -- | -- |
| 18.53 | 0.2 | 12.2 | 0.334 | 0.401 | -0.586 | -- | 0.0434 | 0.194 | 1.67 | 24.6 | 12 | -- | -- |
| 18.53 | 0.2 | 12.2 | 0.329 | 0.399 | -0.585 | -- | -- | 0.191 | 1.68 | 24.6 | 12 | -- | -- |
| 24.71 | 0.233 | 12.2 | 0.453 | -- | -1 | -- | 0.487 | 0.253 | -- | 24.41 | 10 | -- | -- |
| 22.94 | 0.225 | 12.2 | 0.251 | 0.623 | -- | 0.485 | -- | 0.133 | 2.06 | -- | -- | -- | -- |
| 23.83 | 0.229 | 12.2 | 0.236 | 0.625 | -- | -- | -- | 0.13 | 2.15 | -- | -- | -- | -- |
| 24.83 | 0.233 | 12.2 | 0.396 | -- | -0.964 | -- | -- | 0.241 | -- | 24.29 | 9 | -- | -- |
| 21.21 | 0.216 | 12.2 | -- | 0.439 | -0.516 | -- | -- | 0.137 | 1.86 | 24.99 | 10 | -- | -- |
| 47.17 | 0.321 | 12.2 | 0.263 | -- | -- | -- | -- | 0.145 | -- | -- | -- | -- | -- |
| 25.3 | 0.235 | 12.2 | -- | 0.629 | -- | -- | -- | 0.104 | 2.16 | -- | -- | -- | -- |
| 28.84 | 0.251 | 12.2 | -- | -- | -0.91 | -- | -- | 0.185 | -- | 24.5 | 10 | -- | -- |
| 48.99 | 0.327 | 12.2 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.67 | temperature | 15 | 10 | > th | dose dependent | sin | 0 | NA |
| 13 | 16.90 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 18 | 16.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 11 |
| 28 | 17.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 76 | 17.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 90 | 17.64 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 92 | 17.65 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 21 |
| 96 | 17.66 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 102 | 17.68 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 104 | 17.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 108 | 17.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 111 | 17.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 126 | 17.74 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 141 | 17.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 150 | 17.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 152 | 17.82 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 196 | 17.89 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 212 | 17.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 215 | 17.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 223 | 17.93 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 249 | 17.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 400 | 18.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 5 |
| 502 | 18.23 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 11 |
| 519 | 18.24 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 527 | 18.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 561 | 18.31 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 639 | 18.38 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 657 | 18.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 679 | 18.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 762 | 18.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 768 | 18.48 | temperature | 25 | 270 | > th | dose independent | sin | 1 | NA |
| 827 | 18.53 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 851 | 18.55 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 13 |
| 881 | 18.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 24 | 23 |
| 882 | 18.58 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 904 | 18.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 910 | 18.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 914 | 18.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 915 | 18.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 925 | 18.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 953 | 18.64 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 6 |