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Os03g0826200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0271) R2 : 0.76
β1 : -1.72 (0.0991) R2dD : 0.164 R2D : 0.0693
β2 : 2.26 (0.0705) R2dC : 0.541 R2C : 0.473
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.926 (0.0578) R2dN8 : 0.181 R2N8 : 0.0665
σ : 0.509
deviance : 118.1
__
_____
C
peak time of C : 5.39
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.12 0.465 13.3 -1.62 2.58 -0.803 1.91 -0.18 -1.06 5.21 90.71 26 -- --
98.17 0.461 13.3 -1.62 2.58 -0.814 1.84 -- -1.06 5.21 90.81 25 -- --
104.9 0.477 13.3 -1.65 2.54 -0.761 -- 0.795 -1.06 5.18 91 25 -- --
106.18 0.48 13.3 -1.63 2.55 -0.703 -- -- -1.05 5.17 90.45 25 -- --
226.27 0.701 13.3 -1.73 -- 2.02 -- 0.129 -0.753 -- 64 383 -- --
113.12 0.499 13.3 -1.72 2.25 -- 1.43 -- -0.92 5.46 -- -- -- --
118.1 0.509 13.3 -1.72 2.26 -- -- -- -0.926 5.39 -- -- -- --
226.34 0.701 13.3 -1.71 -- 2.03 -- -- -0.759 -- 64 383 -- --
174.83 0.619 13.3 -- 2.63 -0.913 -- -- -0.911 5.07 89.72 26 -- --
383.34 0.915 13.3 -1.64 -- -- -- -- -0.871 -- -- -- -- --
195.99 0.655 13.3 -- 2.23 -- -- -- -0.735 5.42 -- -- -- --
303.06 0.811 13.3 -- -- 2.08 -- -- -0.598 -- 60.87 388 -- --
454.52 0.995 13.3 -- -- -- -- -- -0.688 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.63 humidity 50.0 270 > th dose dependent rect. 21 10
3 91.11 atmosphere 995.0 270 > th dose independent rect. 11 6
4 91.28 atmosphere 1010.0 270 < th dose independent rect. 11 6
6 91.49 precipitation 0.1 270 < th dose independent rect. 17 18
7 91.49 precipitation 0.1 270 < th dose dependent rect. 17 18
8 91.50 wind 1.0 270 > th dose independent rect. 17 18
10 91.63 temperature 30.0 270 < th dose dependent rect. 7 4
11 91.70 temperature 30.0 90 < th dose independent rect. 19 18
12 91.70 radiation 40.0 270 < th dose independent rect. 17 18
13 91.73 wind 7.0 270 < th dose independent rect. 11 6
14 91.74 precipitation 0.1 270 < th dose independent rect. 15 22
15 91.74 precipitation 0.1 270 < th dose dependent rect. 15 22
18 91.95 atmosphere 995.0 270 > th dose independent rect. 12 16
19 91.98 atmosphere 995.0 270 > th dose dependent rect. 12 5
22 92.19 temperature 30.0 270 < th dose dependent rect. 6 6
29 92.27 temperature 15.0 270 > th dose independent rect. 11 6
39 92.54 precipitation 0.1 270 < th dose independent rect. 3 9
40 92.54 precipitation 0.1 270 < th dose dependent rect. 3 9
41 92.55 atmosphere 995.0 270 > th dose dependent rect. 13 2
42 92.57 humidity 90.0 270 < th dose independent rect. 11 6
46 92.80 wind 1.0 270 > th dose independent rect. 11 6
51 92.82 temperature 10.0 270 > th dose independent rect. 17 18
53 92.87 atmosphere 995.0 270 > th dose independent rect. 13 2
54 92.87 humidity 50.0 270 > th dose independent rect. 11 6
63 93.08 humidity 90.0 90 < th dose independent rect. 19 18
67 93.15 precipitation 0.1 270 < th dose independent rect. 11 6
69 93.15 precipitation 0.1 270 < th dose dependent rect. 11 6
71 93.19 wind 9.0 270 < th dose independent rect. 17 18
72 93.20 humidity 90.0 10 < th dose independent rect. 24 14
73 93.24 temperature 15.0 270 > th dose independent rect. 1 15
76 93.25 wind 9.0 270 < th dose independent rect. 12 15
83 93.39 temperature 15.0 1440 > th dose independent rect. 7 8
85 93.41 atmosphere 1010.0 90 < th dose independent rect. 1 17
87 93.42 temperature 10.0 270 > th dose dependent rect. 24 16
105 93.56 radiation 1.0 270 > th dose independent rect. 17 19
107 93.61 radiation 1.0 90 > th dose independent rect. 4 9
123 93.69 humidity 90.0 10 < th dose independent rect. 2 12
125 93.71 temperature 10.0 270 > th dose independent rect. 3 9
126 93.71 atmosphere 995.0 270 > th dose independent rect. 3 9
127 93.71 atmosphere 1015.0 270 < th dose independent rect. 3 9
128 93.71 temperature 10.0 270 > th dose independent rect. 12 15
132 93.77 precipitation 0.1 90 < th dose independent rect. 19 18
133 93.77 precipitation 0.1 90 < th dose dependent rect. 19 18
134 93.80 wind 9.0 270 < th dose independent rect. 13 2
136 93.80 atmosphere 995.0 270 > th dose independent rect. 1 15
140 93.81 wind 7.0 270 < th dose independent rect. 23 17
146 93.83 humidity 50.0 270 > th dose independent rect. 17 18
147 93.85 radiation 1.0 270 > th dose independent rect. 11 6
152 93.89 atmosphere 1005.0 270 > th dose independent rect. 12 5
160 93.94 atmosphere 995.0 10 > th dose dependent rect. 13 6
162 93.95 temperature 10.0 270 > th dose independent rect. 13 2
164 93.95 atmosphere 1010.0 270 < th dose independent rect. 13 2
166 93.95 humidity 90.0 270 < th dose independent rect. 17 14
167 93.95 temperature 10.0 270 > th dose independent rect. 15 22
179 94.02 wind 9.0 270 < th dose independent rect. 3 9
181 94.03 atmosphere 995.0 270 > th dose independent rect. 23 18
183 94.04 wind 1.0 270 > th dose independent rect. 3 9
190 94.09 precipitation 0.1 270 < th dose independent rect. 13 2
193 94.09 precipitation 0.1 270 < th dose dependent rect. 13 2
214 94.23 temperature 30.0 270 < th dose independent rect. 5 7
215 94.24 humidity 50.0 270 > th dose independent rect. 13 2
222 94.27 temperature 30.0 30 < th dose independent rect. 14 5
224 94.27 atmosphere 995.0 270 > th dose independent rect. 17 18
267 94.49 radiation 1.0 10 > th dose independent rect. 6 8
274 94.51 temperature 10.0 270 > th dose dependent rect. 22 9
278 94.55 radiation 30.0 270 > th dose independent rect. 12 21
288 94.61 atmosphere 995.0 10 > th dose independent rect. 14 16
290 94.63 humidity 50.0 270 > th dose independent rect. 23 18
294 94.68 wind 1.0 270 > th dose independent rect. 16 9
299 94.71 wind 1.0 270 > th dose independent rect. 13 2
300 94.71 humidity 90.0 270 < th dose independent rect. 13 2
304 94.72 humidity 50.0 270 > th dose independent rect. 24 16
307 94.74 radiation 1.0 270 > th dose independent rect. 13 2
326 94.78 temperature 10.0 90 > th dose independent rect. 19 18
327 94.78 atmosphere 995.0 90 > th dose independent rect. 19 18
362 94.92 precipitation 0.1 270 < th dose independent rect. 16 9
363 94.92 atmosphere 995.0 270 > th dose independent rect. 11 20
364 94.92 precipitation 0.1 270 < th dose dependent rect. 16 9
365 94.94 temperature 30.0 270 < th dose independent rect. 14 1
376 94.97 radiation 40.0 270 < th dose independent rect. 6 6
386 95.02 wind 9.0 90 < th dose independent rect. 19 18
387 95.03 humidity 90.0 270 > th dose independent rect. 22 9
437 95.16 temperature 15.0 270 > th dose independent rect. 17 6
448 95.19 temperature 15.0 270 > th dose independent rect. 16 8
455 95.21 atmosphere 995.0 270 > th dose dependent rect. 5 7
467 95.27 radiation 40.0 270 < th dose independent rect. 16 9
471 95.27 wind 1.0 90 > th dose dependent rect. 13 6
496 95.34 humidity 90.0 270 < th dose independent rect. 17 8
517 95.42 temperature 30.0 90 < th dose independent rect. 9 4
524 95.44 radiation 1.0 270 > th dose dependent rect. 12 4
527 95.45 precipitation 0.1 270 < th dose independent rect. 7 15
530 95.45 precipitation 0.1 270 < th dose dependent rect. 7 15
554 95.52 humidity 50.0 10 > th dose independent rect. 1 18
556 95.53 atmosphere 1005.0 10 > th dose independent rect. 14 4
564 95.57 radiation 20.0 270 < th dose independent rect. 17 6
587 95.61 radiation 10.0 270 > th dose dependent rect. 12 21
596 95.63 radiation 40.0 270 < th dose dependent rect. 16 7
609 95.66 temperature 15.0 1440 > th dose independent rect. 9 6
614 95.66 wind 9.0 270 < th dose independent rect. 15 22
630 95.69 radiation 40.0 270 < th dose independent rect. 7 4
641 95.72 wind 9.0 270 < th dose independent rect. 16 9
648 95.74 precipitation 0.1 10 < th dose independent rect. 6 8
649 95.74 wind 9.0 10 < th dose independent rect. 14 16
650 95.74 precipitation 0.1 10 < th dose dependent rect. 6 8
656 95.76 atmosphere 995.0 30 > th dose dependent rect. 6 8
658 95.77 wind 9.0 270 < th dose independent rect. 17 6
661 95.77 radiation 40.0 270 < th dose independent rect. 7 15
696 95.85 wind 9.0 10 < th dose independent rect. 6 8
742 95.92 radiation 40.0 270 < th dose dependent rect. 8 14
748 95.94 temperature 10.0 10 > th dose independent rect. 6 8
750 95.94 atmosphere 995.0 10 > th dose independent rect. 6 8
751 95.94 atmosphere 1015.0 10 < th dose independent rect. 6 8
752 95.94 temperature 10.0 10 > th dose independent rect. 14 16
775 95.99 humidity 50.0 270 > th dose independent rect. 12 17
827 96.09 humidity 50.0 10 > th dose independent rect. 14 16
837 96.11 humidity 50.0 270 > th dose independent rect. 17 6
841 96.12 radiation 40.0 30 < th dose independent rect. 13 6
860 96.16 radiation 40.0 270 < th dose dependent rect. 17 18
888 96.21 radiation 40.0 10 < th dose independent rect. 14 16
895 96.22 radiation 20.0 270 < th dose independent rect. 22 9
921 96.26 wind 9.0 10 < th dose independent rect. 1 18
925 96.27 temperature 10.0 270 > th dose independent rect. 22 9
926 96.27 temperature 30.0 270 < th dose independent rect. 22 9
927 96.27 humidity 50.0 270 > th dose independent rect. 22 9
929 96.27 atmosphere 995.0 270 > th dose independent rect. 22 9
932 96.27 temperature 10.0 270 > th dose independent rect. 7 15
948 96.29 wind 9.0 270 < th dose independent rect. 22 9
970 96.32 precipitation 0.1 270 < th dose independent rect. 12 15
982 96.32 precipitation 0.1 270 < th dose dependent rect. 12 15