Os03g0825900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0825900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.91 | 0.467 | 3.22 | 0.398 | 0.211 | 1.2 | 0.423 | 1.83 | 0.121 | 2.12 | 23.39 | 415 | -- | -- |
| 101.78 | 0.47 | 3.18 | 0.622 | 0.205 | 0.871 | 0.53 | -- | 0.198 | 2.02 | 25.82 | 417 | -- | -- |
| 99.43 | 0.464 | 3.22 | 0.375 | 0.209 | 1.29 | -- | 2.05 | 0.114 | 2.82 | 22.93 | 403 | -- | -- |
| 102.71 | 0.472 | 3.18 | 0.626 | 0.177 | 0.881 | -- | -- | 0.206 | 1.67 | 26.47 | 410 | -- | -- |
| 101.87 | 0.47 | 3.22 | 0.393 | -- | 1.39 | -- | 2.25 | 0.118 | -- | 22.86 | 369 | -- | -- |
| 113.17 | 0.499 | 3.22 | 0.406 | 0.279 | -- | 0.523 | -- | 0.0128 | 3.42 | -- | -- | -- | -- |
| 113.98 | 0.5 | 3.22 | 0.396 | 0.286 | -- | -- | -- | 0.00957 | 3.83 | -- | -- | -- | -- |
| 103.42 | 0.474 | 3.17 | 0.638 | -- | 0.93 | -- | -- | 0.221 | -- | 27.83 | 285 | -- | -- |
| 111.9 | 0.493 | 3.2 | -- | 0.215 | 0.617 | -- | -- | 0.0902 | 2.39 | 26.3 | 404 | -- | -- |
| 118.49 | 0.509 | 3.22 | 0.408 | -- | -- | -- | -- | 0.0172 | -- | -- | -- | -- | -- |
| 118.12 | 0.508 | 3.23 | -- | 0.294 | -- | -- | -- | -0.0346 | 3.81 | -- | -- | -- | -- |
| 112.78 | 0.495 | 3.21 | -- | -- | 0.702 | -- | -- | 0.0817 | -- | 30.14 | 121 | -- | -- |
| 122.88 | 0.517 | 3.23 | -- | -- | -- | -- | -- | -0.0281 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 20 |
| 20 | 99.00 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 10 |
| 31 | 99.15 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 33 | 99.20 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 34 | 99.20 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 40 | 99.34 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 44 | 99.36 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 53 | 99.49 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 115 | 99.90 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 130 | 99.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 140 | 100.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 153 | 100.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 177 | 100.16 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 15 |
| 213 | 100.30 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 229 | 100.36 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 233 | 100.37 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 238 | 100.39 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 240 | 100.40 | temperature | 20.0 | 720 | > th | dose independent | sin | 16 | NA |
| 266 | 100.48 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 300 | 100.59 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 17 |
| 323 | 100.62 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 324 | 100.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 328 | 100.65 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 350 | 100.71 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 369 | 100.74 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 385 | 100.76 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 388 | 100.77 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 393 | 100.78 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 407 | 100.82 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 408 | 100.83 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 416 | 100.84 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 432 | 100.87 | temperature | 20.0 | 720 | < th | dose independent | sin | 16 | NA |
| 452 | 100.91 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 468 | 100.93 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 548 | 101.06 | temperature | 10.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 570 | 101.08 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 7 |
| 593 | 101.11 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 689 | 101.25 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 13 |
| 712 | 101.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 23 |
| 721 | 101.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 17 |
| 810 | 101.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 4 |
| 812 | 101.43 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 861 | 101.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 911 | 101.56 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 914 | 101.56 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 21 |
| 944 | 101.59 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 952 | 101.60 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 18 |