Os03g0825800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os03g0825800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.71 | 0.344 | 11.8 | 0.654 | 0.834 | 0.488 | -0.155 | -0.735 | 0.311 | 23.9 | 19.7 | 2658 | -- | -- |
| 54.36 | 0.343 | 11.8 | 0.756 | 0.83 | 0.667 | -0.177 | -- | 0.34 | 23.9 | 19.3 | 2638 | -- | -- |
| 53.8 | 0.342 | 11.8 | 0.658 | 0.829 | 0.481 | -- | -0.76 | 0.311 | 23.9 | 19.7 | 2596 | -- | -- |
| 53.77 | 0.342 | 11.8 | 0.761 | 0.828 | 0.777 | -- | -- | 0.339 | 23.8 | 18.5 | 2634 | -- | -- |
| 95.63 | 0.455 | 11.8 | 0.634 | -- | 0.716 | -- | -0.544 | 0.299 | -- | 19.6 | 2396 | -- | -- |
| 61.85 | 0.369 | 11.8 | 1.08 | 0.859 | -- | -0.216 | -- | 0.479 | 0.0162 | -- | -- | -- | -- |
| 62.05 | 0.369 | 11.8 | 1.09 | 0.86 | -- | -- | -- | 0.48 | 0.0196 | -- | -- | -- | -- |
| 94.43 | 0.453 | 11.8 | 0.688 | -- | 0.919 | -- | -- | 0.33 | -- | 18.4 | 2370 | -- | -- |
| 56.02 | 0.349 | 11.8 | -- | 0.872 | 1.1 | -- | -- | 0.181 | 0.236 | 18.2 | 21102 | -- | -- |
| 108.56 | 0.487 | 11.8 | 1.12 | -- | -- | -- | -- | 0.492 | -- | -- | -- | -- | -- |
| 93.42 | 0.452 | 11.8 | -- | 0.874 | -- | -- | -- | 0.358 | 0.0903 | -- | -- | -- | -- |
| 99.85 | 0.465 | 11.9 | -- | -- | 1.13 | -- | -- | 0.153 | -- | 17.8 | 22568 | -- | -- |
| 141.52 | 0.555 | 11.8 | -- | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.70 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 2 | 48.81 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 7 | 49.12 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 16 | 49.53 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 17 | 49.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 24 | 49.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 26 | 49.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 13 |
| 33 | 50.14 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 13 |
| 55 | 50.32 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 67 | 50.36 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 8 |
| 68 | 50.37 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 70 | 50.38 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 80 | 50.42 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 94 | 50.47 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 96 | 50.49 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 123 | 50.58 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 187 | 50.71 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 196 | 50.72 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 199 | 50.73 | wind | 7.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 218 | 50.76 | wind | 7.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 284 | 50.88 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 345 | 51.03 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 372 | 51.07 | wind | 7.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 408 | 51.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 422 | 51.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 616 | 51.44 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 650 | 51.47 | wind | 9.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 651 | 51.47 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 683 | 51.50 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 715 | 51.53 | wind | 7.0 | 43200 | > th | dose dependent | sin | 21 | NA |
| 727 | 51.54 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 757 | 51.56 | wind | 9.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 759 | 51.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 760 | 51.56 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 768 | 51.56 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 773 | 51.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 781 | 51.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 860 | 51.61 | wind | 9.0 | 43200 | < th | dose independent | sin | 22 | NA |