Os03g0825400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial import inner membrane translocase subunit Tim10.
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Os03g0825400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitochondrial import inner membrane translocase subunit Tim10.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.28 | 0.385 | 11.4 | -0.305 | 1.34 | -0.0845 | -0.424 | -3.08 | -0.208 | 16.1 | 14.91 | 4300 | -- | -- |
| 75.68 | 0.405 | 11.3 | 0.317 | 1.37 | 0.199 | -0.217 | -- | -0.0776 | 16 | 10.49 | 11427 | -- | -- |
| 67.66 | 0.383 | 11.4 | -0.297 | 1.34 | -0.0843 | -- | -3.01 | -0.208 | 16.1 | 15 | 4546 | -- | -- |
| 75.88 | 0.406 | 11.3 | 0.297 | 1.35 | 0.209 | -- | -- | -0.0787 | 16.1 | 10.73 | 11500 | -- | -- |
| 142.73 | 0.559 | 11.3 | -0.129 | -- | 1.38 | -- | -1.68 | -0.3 | -- | 15.72 | 4104 | -- | -- |
| 76.32 | 0.41 | 11.2 | 0.431 | 1.34 | -- | -0.302 | -- | -0.00481 | 16.1 | -- | -- | -- | -- |
| 76.58 | 0.41 | 11.3 | 0.427 | 1.34 | -- | -- | -- | -0.00649 | 16.1 | -- | -- | -- | -- |
| 145.37 | 0.564 | 11.3 | 0.117 | -- | 1.34 | -- | -- | -0.232 | -- | 15.72 | 4104 | -- | -- |
| 77.05 | 0.409 | 11.3 | -- | 1.35 | 0.382 | -- | -- | -0.18 | 16 | 10.57 | 15281 | -- | -- |
| 174.66 | 0.618 | 11.2 | 0.372 | -- | -- | -- | -- | -0.0423 | -- | -- | -- | -- | -- |
| 81.39 | 0.422 | 11.3 | -- | 1.33 | -- | -- | -- | -0.0541 | 16.1 | -- | -- | -- | -- |
| 145.7 | 0.564 | 11.3 | -- | -- | 1.46 | -- | -- | -0.249 | -- | 9.695 | 14844 | -- | -- |
| 178.32 | 0.623 | 11.3 | -- | -- | -- | -- | -- | -0.0836 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 11 |
| 2 | 65.05 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 65.08 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 5 | 65.12 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 6 | 65.12 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 11 | 65.37 | wind | 1.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 18 | 65.43 | wind | 1.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 37 | 65.59 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 123 | 66.08 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 15 | 9 |
| 131 | 66.11 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 133 | 66.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 18 |
| 137 | 66.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 140 | 66.14 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 142 | 66.14 | wind | 1.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 146 | 66.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 150 | 66.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 153 | 66.18 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 154 | 66.18 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 156 | 66.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 170 | 66.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 173 | 66.24 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 174 | 66.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 180 | 66.27 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 181 | 66.27 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 187 | 66.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 16 |
| 201 | 66.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 231 | 66.39 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 236 | 66.40 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 243 | 66.42 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 255 | 66.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 258 | 66.46 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 260 | 66.46 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 261 | 66.46 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 262 | 66.46 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 5 |
| 266 | 66.46 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 268 | 66.46 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 279 | 66.48 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 286 | 66.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 295 | 66.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 299 | 66.51 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 16 | NA |
| 301 | 66.52 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 320 | 66.55 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 327 | 66.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 328 | 66.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 329 | 66.56 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 350 | 66.59 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 360 | 66.61 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 366 | 66.61 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 370 | 66.62 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 375 | 66.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 377 | 66.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 378 | 66.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 381 | 66.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 382 | 66.63 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 384 | 66.63 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 391 | 66.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 394 | 66.64 | temperature | 20.0 | 4320 | > th | dose independent | sin | 17 | NA |
| 405 | 66.65 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 409 | 66.66 | temperature | 20.0 | 4320 | < th | dose independent | sin | 17 | NA |
| 410 | 66.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 416 | 66.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 430 | 66.68 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 468 | 66.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 472 | 66.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 490 | 66.74 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 494 | 66.74 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 496 | 66.74 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 500 | 66.74 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 502 | 66.74 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 521 | 66.75 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 14 |
| 525 | 66.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 530 | 66.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 544 | 66.78 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 553 | 66.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 557 | 66.80 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 558 | 66.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 564 | 66.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 580 | 66.82 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 602 | 66.85 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 610 | 66.86 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 614 | 66.86 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 615 | 66.86 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 19 |
| 616 | 66.86 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 15 | NA |
| 622 | 66.86 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 637 | 66.88 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 646 | 66.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 647 | 66.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 667 | 66.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 688 | 66.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 747 | 66.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 756 | 66.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 778 | 66.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 810 | 67.02 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 812 | 67.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 23 |
| 813 | 67.02 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 827 | 67.04 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 841 | 67.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 849 | 67.07 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 925 | 67.14 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 5 |