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Os03g0824300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : RNA-binding region RNP-1 (RNA recognition motif) domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.37 (0.0275) R2 : 0.469
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.17 (0.0707) R2dC : 0.322 R2C : 0.354
β3 : -0.746 (0.0774) R2dE : 0.12 R2E : 0.143
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0614 (0.0598) R2dN8 : 0.0019 R2N8 : -0.00529
σ : 0.512
deviance : 120.66
__
_____
C
peak time of C : 16.6
E
wheather : temperature
threshold : 31.5
memory length : 2588
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.36 0.511 6.43 -0.694 1.14 -0.37 -0.0472 -2.69 -0.0772 16.6 30.1 1263 -- --
120.77 0.512 6.37 -0.151 1.24 -0.613 -0.0389 -- -0.0337 16.5 31.49 2641 -- --
118.36 0.507 6.43 -0.694 1.14 -0.37 -- -2.69 -0.0772 16.6 30.1 1263 -- --
120.07 0.51 6.37 -0.103 1.18 -0.732 -- -- -0.0638 16.6 31.4 2602 -- --
186.83 0.637 6.43 -0.835 -- -0.411 -- -3.52 -0.111 -- 30.2 1261 -- --
141.89 0.558 6.34 -0.363 1.22 -- 0.116 -- 0.0616 16.4 -- -- -- --
141.93 0.558 6.34 -0.362 1.22 -- -- -- 0.0622 16.4 -- -- -- --
186.79 0.637 6.3 -0.128 -- -0.869 -- -- 0.162 -- 28.8 1264 -- --
120.66 0.512 6.37 -- 1.17 -0.746 -- -- -0.0614 16.6 31.5 2588 -- --
222.29 0.697 6.34 -0.41 -- -- -- -- 0.0298 -- -- -- -- --
145.37 0.564 6.33 -- 1.23 -- -- -- 0.103 16.4 -- -- -- --
187.21 0.637 6.3 -- -- -0.889 -- -- 0.18 -- 28.8 1264 -- --
226.72 0.703 6.32 -- -- -- -- -- 0.0753 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 109.97 atmosphere 1015.0 90 < th dose dependent rect. 3 5
2 110.70 atmosphere 1015.0 270 < th dose dependent rect. 1 5
3 110.71 atmosphere 1015.0 270 < th dose dependent rect. 3 2
5 111.32 wind 7.0 10 < th dose dependent rect. 3 6
8 111.73 wind 9.0 90 < th dose dependent rect. 3 5
14 112.14 precipitation 0.1 90 < th dose independent rect. 3 5
15 112.14 precipitation 0.1 90 < th dose dependent rect. 3 5
16 112.15 precipitation 0.1 270 < th dose independent rect. 1 5
17 112.15 precipitation 0.1 270 < th dose dependent rect. 1 5
21 112.37 wind 5.0 270 < th dose independent rect. 1 5
22 112.38 wind 5.0 90 < th dose independent rect. 3 5
25 112.43 precipitation 0.1 10 < th dose independent rect. 3 6
26 112.43 precipitation 0.1 10 < th dose dependent rect. 3 6
33 112.65 wind 9.0 270 < th dose dependent rect. 1 5
37 112.79 atmosphere 995.0 90 > th dose independent rect. 8 19
41 112.80 radiation 30.0 270 < th dose dependent rect. 15 10
43 112.84 precipitation 0.1 270 < th dose independent rect. 2 3
44 112.84 precipitation 0.1 270 < th dose dependent rect. 2 3
48 112.95 wind 9.0 90 < th dose independent rect. 8 19
49 112.96 atmosphere 1010.0 90 < th dose independent rect. 3 5
53 113.03 temperature 10.0 90 > th dose independent rect. 3 5
55 113.03 temperature 30.0 90 < th dose independent rect. 3 5
56 113.03 humidity 50.0 90 > th dose independent rect. 3 5
58 113.03 atmosphere 995.0 90 > th dose independent rect. 3 5
60 113.03 temperature 10.0 90 > th dose independent rect. 8 19
64 113.07 atmosphere 1010.0 270 < th dose independent rect. 1 5
65 113.07 wind 7.0 270 < th dose dependent rect. 3 2
68 113.10 radiation 40.0 90 < th dose independent rect. 3 5
72 113.14 wind 5.0 270 < th dose independent rect. 2 3
75 113.18 wind 9.0 270 < th dose independent rect. 6 19
80 113.22 temperature 10.0 270 > th dose independent rect. 1 5
82 113.22 temperature 30.0 270 < th dose independent rect. 1 5
83 113.22 humidity 50.0 270 > th dose independent rect. 1 5
86 113.22 atmosphere 995.0 270 > th dose independent rect. 1 5
88 113.22 radiation 20.0 270 < th dose independent rect. 1 5
91 113.22 temperature 10.0 270 > th dose independent rect. 6 19
96 113.35 radiation 10.0 270 < th dose independent rect. 15 10
100 113.44 radiation 40.0 270 < th dose dependent rect. 1 5
109 113.68 precipitation 0.1 270 < th dose independent rect. 12 18
111 113.68 precipitation 0.1 270 < th dose dependent rect. 12 18
114 113.71 precipitation 0.1 270 < th dose independent rect. 1 16
116 113.71 precipitation 0.1 270 < th dose dependent rect. 1 16
119 113.80 wind 7.0 10 < th dose independent rect. 3 6
120 113.80 atmosphere 995.0 10 > th dose independent rect. 9 18
126 113.85 radiation 1.0 270 < th dose independent rect. 5 21
128 113.87 radiation 1.0 270 < th dose independent rect. 11 14
135 114.02 wind 9.0 270 < th dose independent rect. 5 21
137 114.03 temperature 10.0 270 > th dose independent rect. 2 3
139 114.03 temperature 30.0 270 < th dose independent rect. 2 3
140 114.03 humidity 50.0 270 > th dose independent rect. 2 3
143 114.03 atmosphere 995.0 270 > th dose independent rect. 2 3
144 114.03 atmosphere 1010.0 270 < th dose independent rect. 2 3
146 114.03 radiation 20.0 270 < th dose independent rect. 2 3
149 114.03 temperature 10.0 270 > th dose independent rect. 5 21
151 114.04 radiation 40.0 270 < th dose dependent rect. 2 3
157 114.07 wind 9.0 10 < th dose independent rect. 9 18
159 114.10 radiation 1.0 270 < th dose independent rect. 2 3
163 114.12 temperature 10.0 10 > th dose independent rect. 3 6
165 114.12 temperature 30.0 10 < th dose independent rect. 3 6
166 114.12 humidity 50.0 10 > th dose independent rect. 3 6
168 114.12 atmosphere 995.0 10 > th dose independent rect. 3 6
169 114.12 atmosphere 1015.0 10 < th dose independent rect. 3 6
170 114.12 temperature 10.0 10 > th dose independent rect. 9 18
184 114.24 temperature 10.0 90 > th dose dependent rect. 3 5
195 114.34 radiation 1.0 270 < th dose independent rect. 6 19
206 114.45 humidity 50.0 270 > th dose dependent rect. 1 5
265 114.58 radiation 1.0 270 < th dose dependent rect. 5 20
277 114.60 radiation 40.0 10 < th dose independent rect. 3 6
285 114.64 humidity 50.0 270 > th dose dependent rect. 2 3
317 114.90 temperature 10.0 270 > th dose dependent rect. 1 5
322 114.94 radiation 40.0 90 < th dose dependent rect. 3 5
330 115.01 temperature 10.0 10 > th dose dependent rect. 3 5
332 115.02 temperature 15.0 270 > th dose independent rect. 6 6
333 115.03 atmosphere 995.0 270 > th dose independent rect. 6 19
356 115.07 humidity 70.0 90 > th dose independent rect. 19 8
384 115.20 wind 9.0 270 < th dose independent rect. 17 8
391 115.26 humidity 50.0 90 > th dose dependent rect. 3 5
407 115.28 temperature 10.0 270 > th dose independent rect. 17 8
411 115.28 temperature 10.0 270 > th dose independent rect. 1 16
412 115.28 atmosphere 1015.0 270 < th dose independent rect. 1 16
422 115.33 precipitation 0.1 10 < th dose independent rect. 9 18
423 115.33 precipitation 0.1 10 < th dose dependent rect. 9 18
437 115.44 humidity 50.0 90 > th dose dependent rect. 19 8
444 115.52 humidity 50.0 270 > th dose independent rect. 17 8
445 115.52 precipitation 0.1 270 < th dose independent rect. 11 9
446 115.52 precipitation 0.1 270 < th dose dependent rect. 11 9
468 115.63 precipitation 0.1 270 < th dose independent rect. 6 6
469 115.63 wind 9.0 270 < th dose independent rect. 1 16
470 115.63 precipitation 0.1 270 < th dose dependent rect. 6 6
472 115.65 wind 9.0 270 < th dose independent rect. 6 6
475 115.66 precipitation 0.1 270 < th dose independent rect. 6 19
477 115.66 precipitation 0.1 270 < th dose dependent rect. 6 19
479 115.67 precipitation 0.1 90 < th dose independent rect. 8 19
480 115.67 precipitation 0.1 90 < th dose dependent rect. 8 19
500 115.72 atmosphere 995.0 270 > th dose independent rect. 6 6
501 115.72 atmosphere 1015.0 270 < th dose independent rect. 6 6
502 115.72 temperature 10.0 270 > th dose independent rect. 12 18
525 115.85 temperature 10.0 270 > th dose dependent rect. 2 3
541 115.93 wind 9.0 270 < th dose independent rect. 12 18
579 116.01 precipitation 0.1 270 < th dose independent rect. 10 22
581 116.01 precipitation 0.1 270 < th dose dependent rect. 10 22
591 116.07 atmosphere 995.0 270 > th dose independent rect. 17 8
606 116.13 humidity 50.0 90 > th dose dependent rect. 17 10
617 116.22 humidity 50.0 270 > th dose dependent rect. 17 8
631 116.29 radiation 1.0 270 < th dose dependent rect. 1 10
657 116.43 temperature 10.0 270 > th dose dependent rect. 12 18
669 116.49 radiation 1.0 270 > th dose independent rect. 6 6
676 116.51 wind 9.0 270 < th dose dependent rect. 6 6
682 116.54 wind 1.0 270 > th dose independent rect. 11 9
692 116.58 wind 1.0 270 > th dose independent rect. 3 1
709 116.62 humidity 50.0 270 > th dose independent rect. 6 19
722 116.66 radiation 1.0 270 < th dose independent rect. 1 10
726 116.68 humidity 50.0 270 > th dose independent rect. 6 6
732 116.71 temperature 30.0 270 < th dose independent rect. 6 7
791 116.87 wind 9.0 270 < th dose independent rect. 20 15
794 116.88 wind 7.0 90 < th dose independent rect. 19 8
795 116.88 radiation 1.0 270 > th dose independent rect. 11 19
803 116.91 atmosphere 995.0 270 > th dose independent rect. 5 21
813 116.96 temperature 10.0 270 > th dose independent rect. 11 9
814 116.96 atmosphere 1015.0 270 < th dose independent rect. 11 9
815 116.96 temperature 10.0 270 > th dose independent rect. 20 15
816 116.96 atmosphere 995.0 270 > th dose independent rect. 20 15
820 116.98 humidity 70.0 270 > th dose independent rect. 15 10
840 117.03 temperature 10.0 90 > th dose independent rect. 19 8
841 117.03 temperature 30.0 90 < th dose independent rect. 19 8
842 117.03 humidity 50.0 90 > th dose independent rect. 19 8
844 117.03 atmosphere 995.0 90 > th dose independent rect. 19 8
845 117.03 radiation 1.0 90 < th dose independent rect. 19 8
855 117.03 radiation 1.0 90 < th dose dependent rect. 19 8
889 117.18 temperature 30.0 270 < th dose independent rect. 17 8
890 117.18 wind 9.0 90 < th dose dependent rect. 8 19
895 117.21 atmosphere 995.0 90 > th dose dependent rect. 8 19
919 117.26 humidity 90.0 270 < th dose independent rect. 11 9
923 117.26 wind 9.0 270 < th dose dependent rect. 6 19
936 117.32 temperature 10.0 1440 > th dose independent rect. 3 7
939 117.32 atmosphere 995.0 1440 > th dose independent rect. 3 7
940 117.32 temperature 10.0 1440 > th dose independent rect. 10 17
944 117.33 precipitation 0.1 270 < th dose independent rect. 17 8
947 117.33 precipitation 0.1 270 < th dose dependent rect. 17 8
951 117.34 humidity 50.0 270 > th dose independent rect. 20 15
955 117.35 precipitation 0.1 10 < th dose independent rect. 3 17
958 117.35 precipitation 0.1 10 < th dose dependent rect. 3 17
963 117.39 atmosphere 1015.0 270 < th dose independent rect. 12 18
975 117.43 wind 9.0 270 < th dose independent rect. 11 9
993 117.53 wind 9.0 270 < th dose dependent rect. 7 4