Os03g0824200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Putative methylase family protein.
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Os03g0824200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Putative methylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.45 | 0.35 | 12.4 | -0.491 | 0.682 | -1.08 | -0.0587 | -0.159 | 0.0562 | 22.3 | 22.97 | 285 | -- | -- |
| 55.44 | 0.347 | 12.4 | -0.497 | 0.693 | -1.07 | -0.0737 | -- | 0.0585 | 22.3 | 22.8 | 257 | -- | -- |
| 55.42 | 0.347 | 12.4 | -0.484 | 0.687 | -1.11 | -- | -0.211 | 0.0623 | 22.3 | 22.76 | 277 | -- | -- |
| 55.46 | 0.347 | 12.4 | -0.506 | 0.693 | -1.07 | -- | -- | 0.0567 | 22.3 | 22.8 | 258 | -- | -- |
| 76.89 | 0.408 | 12.4 | -0.542 | -- | -1.05 | -- | -0.0369 | -0.0329 | -- | 26.2 | 655 | -- | -- |
| 68.04 | 0.387 | 12.4 | -0.269 | 0.673 | -- | -0.0736 | -- | 0.199 | 21.7 | -- | -- | -- | -- |
| 68.06 | 0.386 | 12.4 | -0.266 | 0.674 | -- | -- | -- | 0.199 | 21.7 | -- | -- | -- | -- |
| 76.89 | 0.408 | 12.4 | -0.551 | -- | -1.04 | -- | -- | -0.0328 | -- | 26.2 | 652 | -- | -- |
| 61.47 | 0.365 | 12.4 | -- | 0.685 | -0.817 | -- | -- | 0.139 | 22.1 | 22.9 | 254 | -- | -- |
| 95.05 | 0.456 | 12.4 | -0.26 | -- | -- | -- | -- | 0.198 | -- | -- | -- | -- | -- |
| 69.92 | 0.391 | 12.4 | -- | 0.673 | -- | -- | -- | 0.228 | 21.7 | -- | -- | -- | -- |
| 83.99 | 0.427 | 12.4 | -- | -- | -0.828 | -- | -- | 0.0692 | -- | 26.27 | 632 | -- | -- |
| 96.83 | 0.459 | 12.4 | -- | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.40 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 2 | 53.43 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 3 | 53.44 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 22 |
| 11 | 53.84 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 16 |
| 12 | 53.84 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 20 | 54.10 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 36 | 54.38 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 38 | 54.45 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 39 | 54.45 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 56 | 54.58 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 58 | 54.62 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 76 | 54.76 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 83 | 54.88 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 96 | 55.03 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 112 | 55.21 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 19 |
| 154 | 55.46 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 8 |
| 184 | 55.57 | temperature | 20 | 270 | < th | dose independent | rect. | 8 | 23 |
| 202 | 55.68 | wind | 9 | 14400 | < th | dose independent | sin | 5 | NA |
| 206 | 55.69 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 10 |
| 208 | 55.70 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 222 | 55.79 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 223 | 55.79 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 236 | 55.84 | temperature | 20 | 270 | > th | dose independent | sin | 10 | NA |
| 238 | 55.85 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 23 |
| 251 | 55.92 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 23 |
| 259 | 55.95 | temperature | 20 | 270 | < th | dose independent | sin | 10 | NA |
| 289 | 56.06 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 23 |
| 321 | 56.17 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 322 | 56.17 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 389 | 56.40 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 390 | 56.41 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 392 | 56.42 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 19 |
| 405 | 56.46 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 413 | 56.48 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 418 | 56.49 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 425 | 56.51 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 10 |
| 437 | 56.54 | temperature | 20 | 90 | > th | dose independent | rect. | 11 | 17 |
| 441 | 56.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 449 | 56.56 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 453 | 56.56 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 458 | 56.57 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 475 | 56.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 478 | 56.62 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 494 | 56.67 | wind | 9 | 14400 | > th | dose independent | sin | 6 | NA |
| 522 | 56.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 536 | 56.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 595 | 56.89 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 13 |
| 692 | 57.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 751 | 57.16 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 17 |
| 760 | 57.17 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 19 |
| 775 | 57.19 | temperature | 20 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 779 | 57.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 789 | 57.21 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 21 |
| 852 | 57.28 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 876 | 57.30 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 909 | 57.33 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 965 | 57.39 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 990 | 57.41 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 995 | 57.42 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 9 |