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Os03g0823500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : TGF-beta receptor, type I/II extracellular region family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.67 (0.0287) R2 : 0.645
β1 : -2.45 (0.105) R2dD : 0.44 R2D : 0.436
β2 : 1.1 (0.0683) R2dC : 0.204 R2C : 0.216
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.139 (0.0612) R2dN8 : 0.00538 R2N8 : -0.0114
σ : 0.539
deviance : 132.62
__
_____
C
peak time of C : 12.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
114.06 0.502 9.66 -2.61 1.01 -0.93 -0.526 -2.56 -0.115 13.1 46.28 2547 -- --
119.21 0.509 9.66 -2.44 1.03 -0.946 -0.46 -- -0.0887 13.1 46.82 2547 -- --
114.91 0.499 9.67 -2.68 1.02 -1 -- -2.67 -0.169 13 48.77 2545 -- --
119.95 0.51 9.66 -2.45 1.03 -0.932 -- -- -0.0962 13.1 46.74 2547 -- --
177.63 0.621 9.67 -2.68 -- -1.29 -- -3.15 -0.124 -- 48.55 2548 -- --
132.15 0.539 9.66 -2.44 1.1 -- -0.337 -- -0.137 12.9 -- -- -- --
132.62 0.539 9.67 -2.45 1.1 -- -- -- -0.139 12.9 -- -- -- --
176.53 0.619 9.64 -2.38 -- -0.989 -- -- 0.00385 -- 34.67 1215 -- --
275.16 0.773 9.59 -- 1.06 -0.9 -- -- 0.244 13.1 40 2660 -- --
208.53 0.675 9.68 -2.49 -- -- -- -- -0.159 -- -- -- -- --
290.75 0.798 9.6 -- 1.14 -- -- -- 0.134 13 -- -- -- --
318.9 0.832 9.61 -- -- -1.12 -- -- 0.372 -- 21.08 1235 -- --
372.07 0.9 9.62 -- -- -- -- -- 0.117 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 112.37 wind 7.0 270 < th dose independent rect. 1 17
2 112.74 humidity 70.0 14400 < th dose independent rect. 11 1
4 113.17 wind 7.0 270 < th dose independent rect. 11 8
7 113.63 wind 7.0 270 < th dose independent rect. 23 20
8 113.76 humidity 70.0 14400 > th dose independent rect. 11 1
9 113.82 wind 7.0 90 < th dose independent rect. 15 15
14 114.03 radiation 40.0 14400 > th dose dependent rect. 14 1
32 114.22 wind 5.0 270 < th dose independent rect. 18 6
34 114.28 temperature 20.0 270 > th dose independent rect. 18 7
42 114.41 temperature 10.0 270 > th dose dependent rect. 19 5
43 114.43 temperature 10.0 270 > th dose dependent rect. 18 7
46 114.49 radiation 20.0 14400 > th dose dependent rect. 6 2
60 114.50 wind 5.0 270 < th dose independent rect. 19 4
66 114.63 humidity 70.0 14400 > th dose independent rect. 10 5
74 114.77 temperature 10.0 270 > th dose dependent rect. 1 17
75 114.79 atmosphere 1010.0 270 < th dose independent rect. 11 8
76 114.79 wind 1.0 270 > th dose independent rect. 1 17
82 114.88 temperature 30.0 14400 < th dose independent rect. 12 1
84 114.93 temperature 30.0 14400 > th dose independent rect. 12 1
86 114.98 radiation 40.0 14400 > th dose independent rect. 14 1
87 114.98 radiation 10.0 14400 > th dose independent rect. 7 2
108 115.08 temperature 10.0 270 > th dose dependent rect. 11 8
113 115.13 precipitation 0.1 270 < th dose independent rect. 1 17
115 115.13 precipitation 0.1 270 < th dose dependent rect. 1 17
117 115.16 wind 9.0 270 < th dose dependent rect. 18 6
118 115.17 wind 7.0 270 < th dose independent rect. 13 16
119 115.17 wind 1.0 43200 > th dose dependent rect. 3 1
124 115.21 temperature 30.0 90 < th dose independent rect. 6 20
126 115.24 humidity 70.0 14400 < th dose independent rect. 14 1
131 115.28 precipitation 0.1 270 < th dose independent rect. 18 7
132 115.28 wind 9.0 43200 < th dose dependent rect. 3 2
133 115.28 precipitation 0.1 270 < th dose dependent rect. 18 7
135 115.29 atmosphere 995.0 270 > th dose independent rect. 18 7
137 115.32 humidity 80.0 14400 < th dose independent rect. 9 1
147 115.36 humidity 60.0 270 > th dose independent rect. 18 7
148 115.37 temperature 25.0 43200 < th dose dependent rect. 8 1
149 115.39 temperature 10.0 270 > th dose independent rect. 11 8
151 115.39 temperature 10.0 270 > th dose independent rect. 19 16
152 115.39 atmosphere 995.0 270 > th dose independent rect. 19 16
158 115.42 radiation 10.0 270 < th dose independent rect. 18 7
164 115.43 radiation 40.0 14400 < th dose dependent rect. 7 1
166 115.44 precipitation 0.1 43200 < th dose independent rect. 3 14
168 115.44 radiation 10.0 270 < th dose dependent rect. 18 7
169 115.44 precipitation 0.1 43200 < th dose dependent rect. 3 14
176 115.46 temperature 10.0 270 > th dose independent rect. 18 7
181 115.46 precipitation 0.1 43200 > th dose independent rect. 3 14
182 115.46 temperature 10.0 270 > th dose independent rect. 1 17
183 115.46 atmosphere 1015.0 270 < th dose independent rect. 1 17
184 115.47 radiation 1.0 14400 > th dose dependent rect. 7 1
197 115.47 precipitation 0.1 43200 > th dose dependent rect. 4 13
203 115.48 wind 9.0 270 < th dose independent rect. 19 16
207 115.50 temperature 25.0 43200 > th dose independent rect. 9 5
211 115.51 wind 9.0 270 < th dose independent rect. 18 7
217 115.52 atmosphere 1000.0 90 > th dose independent rect. 6 9
223 115.53 temperature 15.0 90 > th dose independent rect. 15 15
226 115.54 precipitation 0.1 270 < th dose independent rect. 11 8
231 115.54 precipitation 0.1 270 < th dose dependent rect. 11 8
235 115.55 precipitation 0.1 43200 > th dose dependent rect. 24 17
236 115.56 radiation 10.0 14400 < th dose independent rect. 8 1
237 115.56 temperature 25.0 43200 < th dose independent rect. 9 4
238 115.56 temperature 30.0 270 < th dose independent rect. 18 7
243 115.57 radiation 10.0 14400 < th dose dependent rect. 7 2
246 115.58 precipitation 0.1 43200 < th dose independent rect. 4 6
247 115.58 radiation 40.0 14400 > th dose dependent rect. 8 2
252 115.58 precipitation 0.1 43200 < th dose dependent rect. 4 6
276 115.60 wind 1.0 270 > th dose independent rect. 11 8
277 115.60 humidity 90.0 43200 > th dose dependent rect. 16 1
278 115.60 wind 9.0 270 < th dose dependent rect. 19 4
284 115.61 atmosphere 1000.0 270 > th dose independent rect. 6 7
285 115.61 temperature 25.0 14400 > th dose dependent rect. 1 1
288 115.62 temperature 30.0 14400 > th dose dependent rect. 14 1
289 115.62 radiation 1.0 270 < th dose dependent rect. 5 20
302 115.64 precipitation 0.1 43200 > th dose independent rect. 24 17
304 115.65 radiation 40.0 14400 < th dose independent rect. 14 1
305 115.65 radiation 10.0 14400 > th dose independent rect. 7 5
311 115.66 humidity 50.0 270 > th dose independent rect. 19 16
315 115.66 temperature 25.0 14400 > th dose dependent rect. 22 4
316 115.66 precipitation 0.1 43200 > th dose dependent rect. 4 6
325 115.67 temperature 25.0 14400 > th dose dependent rect. 11 1
340 115.70 precipitation 0.1 43200 < th dose independent rect. 4 2
344 115.70 precipitation 0.1 43200 < th dose dependent rect. 4 2
352 115.72 precipitation 0.1 43200 < th dose independent rect. 24 20
353 115.72 precipitation 0.1 43200 < th dose dependent rect. 24 20
354 115.73 precipitation 0.1 43200 > th dose independent rect. 24 20
376 115.76 precipitation 0.1 43200 > th dose independent rect. 4 6
380 115.76 temperature 30.0 43200 < th dose dependent rect. 12 1
404 115.80 humidity 50.0 270 > th dose dependent rect. 18 7
405 115.80 precipitation 0.1 43200 > th dose dependent rect. 4 10
432 115.83 atmosphere 1015.0 270 < th dose dependent rect. 11 8
473 115.88 precipitation 0.1 43200 > th dose independent sin 3 NA
482 115.89 precipitation 0.1 43200 < th dose independent sin 3 NA
484 115.89 precipitation 0.1 43200 < th dose dependent sin 3 NA
494 115.91 humidity 90.0 43200 > th dose independent rect. 16 1
502 115.91 humidity 90.0 43200 > th dose dependent rect. 15 4
506 115.92 wind 9.0 43200 < th dose independent rect. 10 3
509 115.92 precipitation 0.1 43200 < th dose independent rect. 3 17
513 115.92 temperature 25.0 14400 > th dose dependent rect. 23 1
517 115.92 precipitation 0.1 43200 < th dose dependent rect. 3 17
535 115.94 precipitation 0.1 43200 > th dose independent rect. 3 10
536 115.94 precipitation 0.1 43200 < th dose independent rect. 3 10
540 115.94 precipitation 0.1 43200 < th dose dependent rect. 3 10
541 115.94 radiation 10.0 14400 < th dose dependent rect. 17 16
542 115.95 radiation 40.0 1440 > th dose independent rect. 14 1
566 115.97 precipitation 0.1 43200 > th dose independent rect. 4 2
573 115.97 precipitation 0.1 43200 > th dose dependent rect. 4 2
575 115.97 temperature 25.0 14400 > th dose dependent rect. 22 15
577 115.97 radiation 10.0 14400 < th dose dependent rect. 17 19
578 115.98 humidity 80.0 14400 > th dose independent rect. 8 1
594 115.99 precipitation 0.1 270 < th dose independent rect. 19 16
600 115.99 precipitation 0.1 270 < th dose dependent rect. 19 16
623 116.01 humidity 80.0 10 > th dose independent rect. 21 5
638 116.02 temperature 30.0 14400 < th dose independent rect. 11 14
665 116.03 radiation 40.0 14400 < th dose independent rect. 14 11
677 116.03 radiation 40.0 14400 < th dose independent rect. 14 20
688 116.04 humidity 70.0 14400 > th dose independent rect. 14 1
750 116.07 radiation 40.0 1440 < th dose independent rect. 14 1
790 116.08 radiation 10.0 14400 > th dose independent rect. 17 19
806 116.09 radiation 10.0 14400 > th dose independent rect. 5 7
853 116.10 radiation 10.0 14400 > th dose independent rect. 5 5
885 116.10 radiation 10.0 14400 < th dose dependent rect. 23 10
907 116.11 precipitation 0.1 43200 > th dose dependent rect. 24 5
966 116.12 precipitation 0.1 43200 > th dose dependent rect. 18 23
967 116.13 radiation 10.0 14400 > th dose independent sin 6 NA
969 116.13 radiation 30.0 14400 > th dose independent rect. 7 1
997 116.13 humidity 70.0 43200 > th dose dependent rect. 11 1