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Os03g0823400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Bowman-Birk type trypsin inhibitor (WTI).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0754) R2 : 0.554
β1 : -5.55 (0.276) R2dD : 0.44 R2D : 0.428
β2 : 3.03 (0.496) R2dC : 0.272 R2C : -0.44
β3 : 3.51 (0.426) R2dE : 0.545 R2E : -0.162
β4 : 3.22 (0.678) R2dD*C : 0.0205 R2D*C : -0.0011
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.402 (0.16) R2dN8 : 0.00988 R2N8 : -0.0103
σ : 1.39
deviance : 896.27
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_____
C
peak time of C : 12.6
E
wheather : radiation
threshold : 3.158
memory length : 130
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.78
open length of G : 22.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
888.42 1.4 10.6 -5.88 2.83 3.44 6.33 3.07 -0.474 12.7 3.116 137 4.79 22.7
896.27 1.39 10.6 -5.55 3.03 3.51 3.22 -- -0.402 12.6 3.158 130 4.78 22.9
947.86 1.43 10.4 -5.82 2.68 3.36 -- -1.05 -0.454 12.1 5.161 136 5.3 22.3
934.24 1.42 10.6 -5.53 2.96 3.54 -- -- -0.396 12.6 3.029 131 4.81 22.8
1040.46 1.51 10.6 -5.73 -- 0.854 -- -1.23 -0.499 -- 5.161 136 5.3 22.3
1034.71 1.51 10.7 -5.93 0.916 -- -2.8 -- -0.548 24 -- -- -- --
1064.4 1.53 10.7 -5.81 0.971 -- -- -- -0.529 22.8 -- -- -- --
995.13 1.47 10.6 -5.72 -- 1.19 -- -- -0.461 -- 3.392 102 5.38 22.2
1737.98 1.94 10.6 -- 3.47 3.98 -- -- -0.0219 12.4 1.73 130 4.85 22.6
1122.74 1.57 10.6 -5.79 -- -- -- -- -0.523 -- -- -- -- --
1954.46 2.07 10.5 -- 0.931 -- -- -- 0.118 22.4 -- -- -- --
1537.63 1.83 10.5 -- -- 3.74 -- -- 0.0905 -- 0.000241 17534 5.27 22.6
2007.41 2.09 10.5 -- -- -- -- -- 0.119 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 869.50 humidity 80 14400 < th dose independent rect. 22 5
2 869.58 humidity 80 14400 < th dose independent rect. 22 9
4 870.01 humidity 80 14400 > th dose independent rect. 22 9
12 873.04 humidity 80 14400 < th dose independent rect. 5 1
17 874.04 humidity 80 14400 > th dose independent rect. 23 4
18 874.36 humidity 80 14400 < th dose dependent rect. 2 1
21 874.84 humidity 80 14400 < th dose dependent rect. 23 4
25 875.00 humidity 80 14400 > th dose independent rect. 4 2
34 875.67 humidity 80 14400 < th dose dependent rect. 22 8
76 878.01 humidity 80 14400 < th dose dependent rect. 5 1
136 885.94 wind 9 43200 > th dose dependent rect. 13 1
145 888.78 wind 1 43200 < th dose dependent rect. 9 2
150 890.58 wind 1 43200 > th dose independent rect. 9 3
152 891.62 wind 1 43200 < th dose independent rect. 9 3
166 897.84 wind 3 14400 < th dose independent rect. 3 1
171 899.79 wind 7 14400 > th dose independent rect. 12 2
177 900.89 wind 9 14400 < th dose independent rect. 18 21
180 901.48 wind 3 14400 > th dose independent rect. 3 1
183 902.42 wind 7 14400 > th dose dependent rect. 12 3
184 902.63 wind 7 14400 < th dose independent rect. 12 2
187 902.97 wind 9 14400 > th dose dependent rect. 18 21
188 903.11 wind 9 14400 > th dose independent rect. 18 21
192 903.60 wind 7 14400 > th dose dependent rect. 3 12
202 904.50 wind 9 14400 < th dose independent rect. 20 19
205 904.78 wind 3 14400 > th dose independent rect. 2 3
212 905.93 wind 7 14400 > th dose dependent rect. 10 5
215 906.05 wind 9 14400 > th dose independent rect. 20 19
236 907.99 wind 9 14400 < th dose independent rect. 2 13
251 909.36 wind 9 14400 < th dose independent rect. 23 16
265 910.85 wind 9 14400 > th dose dependent rect. 20 19
281 912.72 wind 7 14400 > th dose independent rect. 3 12
297 914.19 wind 1 14400 > th dose dependent rect. 3 1
309 914.81 wind 5 14400 < th dose dependent rect. 3 1
323 915.45 wind 7 14400 > th dose dependent sin 3 NA
333 916.13 wind 7 14400 > th dose independent rect. 23 17
384 918.29 wind 3 14400 > th dose dependent rect. 2 12
393 918.69 wind 7 14400 > th dose independent sin 3 NA
403 919.23 humidity 80 1440 < th dose independent rect. 7 1
404 919.33 wind 7 14400 < th dose independent sin 3 NA
473 922.51 radiation 1 90 < th dose dependent rect. 5 23
480 922.74 radiation 1 10 > th dose independent rect. 17 13
484 922.96 wind 9 14400 < th dose independent sin 6 NA
533 924.76 wind 9 14400 > th dose dependent rect. 12 23
558 925.46 humidity 80 1440 > th dose independent rect. 7 1
577 925.88 radiation 1 90 < th dose independent rect. 6 22
581 926.03 wind 9 14400 < th dose independent rect. 2 19
583 926.08 wind 9 14400 > th dose dependent rect. 3 18
589 926.17 wind 9 14400 > th dose dependent rect. 23 22
612 926.91 wind 9 14400 < th dose independent rect. 12 23
616 926.98 wind 9 14400 < th dose independent rect. 23 22
632 927.32 wind 9 14400 > th dose dependent rect. 10 22
637 927.50 temperature 25 30 > th dose dependent sin 15 NA
650 927.81 wind 9 14400 > th dose independent rect. 3 18
660 927.93 radiation 1 30 < th dose dependent sin 13 NA
664 928.00 wind 9 14400 > th dose dependent rect. 3 22
672 928.11 wind 9 14400 > th dose independent rect. 23 22
673 928.12 wind 3 14400 > th dose dependent sin 4 NA
686 928.34 wind 9 14400 > th dose dependent no NA NA
717 928.64 wind 9 14400 > th dose dependent rect. 12 20
719 928.66 wind 9 14400 > th dose independent rect. 12 23
739 928.92 atmosphere 1000 30 > th dose independent rect. 5 14
754 929.21 wind 9 14400 > th dose dependent rect. 10 11
773 929.65 humidity 60 270 > th dose independent rect. 15 10
788 929.92 wind 9 14400 < th dose independent rect. 10 23
811 930.18 wind 9 14400 > th dose dependent rect. 12 9
850 930.67 radiation 1 90 < th dose independent sin 14 NA
859 930.72 humidity 50 4320 < th dose independent rect. 15 20
871 930.86 wind 9 14400 < th dose independent no NA NA
884 930.98 wind 9 14400 > th dose independent rect. 10 22
896 931.06 radiation 1 30 < th dose dependent rect. 19 23
898 931.08 wind 9 14400 < th dose independent rect. 8 23
902 931.11 radiation 1 30 < th dose dependent rect. 21 23
908 931.25 humidity 50 4320 < th dose independent rect. 15 2
913 931.29 wind 9 14400 > th dose independent no NA NA
920 931.30 wind 9 14400 > th dose dependent rect. 10 15
921 931.31 wind 9 14400 > th dose independent sin 7 NA
935 931.52 wind 9 14400 > th dose independent rect. 10 11
941 931.55 wind 9 14400 < th dose independent rect. 10 11
963 931.66 wind 9 14400 > th dose independent rect. 7 23
979 931.74 temperature 30 90 < th dose independent sin 13 NA