Os03g0821300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to TA11 protein (Fragment).
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Os03g0821300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to TA11 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.78 | 0.321 | 11.7 | 0.704 | 0.607 | -1.14 | -0.68 | -0.108 | 0.305 | 8.19 | 9.313 | 362 | -- | -- |
| 46.79 | 0.319 | 11.7 | 0.721 | 0.607 | -1.14 | -0.666 | -- | 0.31 | 8.2 | 8.965 | 361 | -- | -- |
| 48.09 | 0.323 | 11.7 | 0.734 | 0.618 | -1.12 | -- | 0.245 | 0.316 | 8.17 | 8.518 | 362 | -- | -- |
| 48.14 | 0.323 | 11.7 | 0.697 | 0.615 | -1.12 | -- | -- | 0.307 | 8.21 | 9.026 | 356 | -- | -- |
| 62.51 | 0.368 | 11.7 | 0.907 | -- | -1.51 | -- | 0.472 | 0.415 | -- | 16.2 | 518 | -- | -- |
| 61.06 | 0.366 | 11.8 | 0.464 | 0.879 | -- | -0.484 | -- | 0.144 | 7.31 | -- | -- | -- | -- |
| 61.69 | 0.368 | 11.8 | 0.453 | 0.878 | -- | -- | -- | 0.145 | 7.28 | -- | -- | -- | -- |
| 62.71 | 0.369 | 11.7 | 0.825 | -- | -1.52 | -- | -- | 0.391 | -- | 15.87 | 513 | -- | -- |
| 59.61 | 0.36 | 11.7 | -- | 0.691 | -0.788 | -- | -- | 0.189 | 7.78 | 9.639 | 362 | -- | -- |
| 102.61 | 0.473 | 11.8 | 0.469 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 67.11 | 0.383 | 11.8 | -- | 0.883 | -- | -- | -- | 0.0942 | 7.25 | -- | -- | -- | -- |
| 75.95 | 0.406 | 11.8 | -- | -- | -1.05 | -- | -- | 0.194 | -- | 24.1 | 513 | -- | -- |
| 108.4 | 0.486 | 11.8 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 3 | 46.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 4 | 46.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 5 | 46.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 11 | 46.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 18 | 46.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 22 | 46.59 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 47 | 46.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 50 | 46.96 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 57 | 46.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 59 | 47.00 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 126 | 47.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 143 | 47.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 160 | 47.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 192 | 47.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 246 | 47.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 372 | 48.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 405 | 48.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 451 | 48.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 20 |
| 483 | 48.54 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 499 | 48.56 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 567 | 48.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 18 |
| 592 | 48.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 619 | 48.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 673 | 48.72 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 733 | 48.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 754 | 48.79 | temperature | 30 | 90 | < th | dose dependent | sin | 20 | NA |
| 848 | 48.86 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 997 | 48.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 11 |