Os03g0821100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Non-cell-autonomous heat shock cognate protein 70.
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Os03g0821100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Non-cell-autonomous heat shock cognate protein 70.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.38 | 0.368 | 13.2 | 0.351 | 1.55 | 1.78 | 1.15 | 1.63 | 0.0299 | 13.4 | 24.64 | 85 | -- | -- |
| 64.07 | 0.376 | 13.2 | 0.576 | 1.55 | 1.6 | 0.671 | -- | 0.0734 | 13.3 | 24.64 | 85 | -- | -- |
| 65.19 | 0.379 | 13.2 | 0.502 | 1.54 | 1.73 | -- | 0.732 | 0.0211 | 13.3 | 23.8 | 63 | -- | -- |
| 65.78 | 0.38 | 13.2 | 0.599 | 1.55 | 1.6 | -- | -- | 0.0763 | 13.4 | 24.61 | 6 | -- | -- |
| 145.42 | 0.562 | 13.2 | 0.371 | -- | 1.76 | -- | 1.37 | -0.0159 | -- | 28.82 | 986 | -- | -- |
| 101.86 | 0.473 | 13.3 | 0.203 | 1.25 | -- | 0.667 | -- | -0.221 | 13.3 | -- | -- | -- | -- |
| 103.64 | 0.477 | 13.3 | 0.226 | 1.26 | -- | -- | -- | -0.217 | 13.4 | -- | -- | -- | -- |
| 144.65 | 0.56 | 13.2 | 0.722 | -- | 1.85 | -- | -- | 0.153 | -- | 29.5 | 999 | -- | -- |
| 74.4 | 0.404 | 13.2 | -- | 1.5 | 1.38 | -- | -- | -0.0261 | 13.4 | 24.61 | 6 | -- | -- |
| 200.47 | 0.662 | 13.3 | 0.177 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 104.99 | 0.479 | 13.3 | -- | 1.25 | -- | -- | -- | -0.242 | 13.4 | -- | -- | -- | -- |
| 156.74 | 0.583 | 13.2 | -- | -- | 1.55 | -- | -- | 0.0114 | -- | 29.6 | 984 | -- | -- |
| 201.29 | 0.662 | 13.3 | -- | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 2 | 55.48 | temperature | 25 | 270 | < th | dose dependent | sin | 14 | NA |
| 7 | 55.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 34 | 57.28 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 45 | 57.61 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 47 | 57.62 | temperature | 15 | 270 | > th | dose dependent | sin | 12 | NA |
| 76 | 57.84 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 165 | 59.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 173 | 59.43 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 216 | 60.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 279 | 60.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 331 | 61.23 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 365 | 61.53 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 369 | 61.56 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 377 | 61.62 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 402 | 61.82 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 403 | 61.82 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 410 | 61.86 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 445 | 62.07 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 477 | 62.27 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 499 | 62.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 633 | 63.75 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 11 |
| 740 | 64.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 837 | 65.25 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 10 |
| 926 | 65.97 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 23 |
| 933 | 66.01 | temperature | 20 | 90 | > th | dose independent | sin | 13 | NA |
| 977 | 66.32 | temperature | 10 | 720 | > th | dose dependent | sin | 17 | NA |