Os03g0819300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Annexin A7 (Annexin VII) (Synexin) (Fragment).
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Os03g0819300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Annexin A7 (Annexin VII) (Synexin) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 361.76 | 0.894 | 3.15 | 0.0874 | 0.101 | 0.489 | -0.161 | 1.33 | -0.106 | 16 | 1.3 | 1128 | -- | -- |
| 364.25 | 0.889 | 3.13 | 0.154 | 0.102 | 0.648 | -0.165 | -- | -0.122 | 15.8 | 1.2 | 1130 | -- | -- |
| 361.79 | 0.886 | 3.15 | 0.085 | 0.1 | 0.496 | -- | 1.31 | -0.104 | 15 | 1.295 | 1127 | -- | -- |
| 364.23 | 0.889 | 3.13 | 0.156 | 0.103 | 0.661 | -- | -- | -0.125 | 14.2 | 1.2 | 1128 | -- | -- |
| 362.38 | 0.887 | 3.15 | 0.0781 | -- | 0.479 | -- | 1.34 | -0.106 | -- | 1.274 | 1121 | -- | -- |
| 373.1 | 0.906 | 3.1 | -0.0769 | 0.0674 | -- | -0.307 | -- | 0.00696 | 17.1 | -- | -- | -- | -- |
| 373.32 | 0.905 | 3.1 | -0.0767 | 0.0663 | -- | -- | -- | 0.00561 | 16.3 | -- | -- | -- | -- |
| 364.86 | 0.89 | 3.13 | 0.142 | -- | 0.639 | -- | -- | -0.125 | -- | 1.265 | 1130 | -- | -- |
| 364.75 | 0.89 | 3.13 | -- | 0.0964 | 0.642 | -- | -- | -0.126 | 14.3 | 1.192 | 1123 | -- | -- |
| 373.56 | 0.903 | 3.1 | -0.0793 | -- | -- | -- | -- | 0.00385 | -- | -- | -- | -- | -- |
| 373.48 | 0.904 | 3.1 | -- | 0.0678 | -- | -- | -- | 0.0142 | 16.3 | -- | -- | -- | -- |
| 365.29 | 0.89 | 3.13 | -- | -- | 0.622 | -- | -- | -0.124 | -- | 1.114 | 1123 | -- | -- |
| 373.73 | 0.902 | 3.09 | -- | -- | -- | -- | -- | 0.0127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 350.86 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 350.86 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 58 | 357.93 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 6 |
| 63 | 358.86 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 65 | 358.90 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 14 |
| 67 | 359.49 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 69 | 359.62 | temperature | 25 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 70 | 359.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 76 | 359.97 | humidity | 80 | 4320 | < th | dose dependent | rect. | 1 | 7 |
| 83 | 360.25 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 12 |
| 85 | 360.27 | humidity | 80 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 94 | 360.55 | humidity | 80 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 97 | 360.70 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 1 |
| 99 | 360.70 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 101 | 360.74 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 10 | 1 |
| 114 | 360.98 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 115 | 360.98 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 117 | 360.99 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 138 | 361.31 | wind | 1 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 146 | 361.38 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 147 | 361.42 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 1 |
| 148 | 361.42 | wind | 1 | 720 | > th | dose independent | rect. | 19 | 22 |
| 153 | 361.50 | humidity | 90 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 159 | 361.58 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 1 |
| 176 | 361.58 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 198 | 361.66 | humidity | 80 | 4320 | > th | dose independent | rect. | 2 | 3 |
| 200 | 361.68 | humidity | 80 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 211 | 361.83 | humidity | 80 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 212 | 361.83 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 3 |
| 215 | 361.84 | humidity | 80 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 216 | 361.87 | humidity | 80 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 232 | 361.96 | humidity | 80 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 238 | 361.99 | humidity | 80 | 4320 | < th | dose independent | rect. | 2 | 3 |
| 268 | 362.19 | temperature | 25 | 270 | < th | dose independent | sin | 8 | NA |
| 312 | 362.39 | temperature | 25 | 270 | > th | dose independent | sin | 8 | NA |
| 321 | 362.41 | wind | 1 | 1440 | > th | dose independent | rect. | 2 | 20 |
| 322 | 362.41 | humidity | 90 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 329 | 362.43 | wind | 1 | 720 | > th | dose independent | rect. | 2 | 15 |
| 330 | 362.43 | humidity | 80 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 345 | 362.50 | wind | 3 | 30 | > th | dose independent | rect. | 6 | 1 |
| 363 | 362.55 | radiation | 40 | 30 | > th | dose dependent | rect. | 13 | 2 |
| 394 | 362.60 | wind | 1 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 416 | 362.67 | wind | 3 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 426 | 362.71 | humidity | 90 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 439 | 362.78 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 455 | 362.83 | wind | 1 | 720 | > th | dose independent | rect. | 9 | 22 |
| 460 | 362.84 | wind | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 463 | 362.85 | wind | 1 | 720 | > th | dose independent | rect. | 19 | 12 |
| 473 | 362.88 | radiation | 30 | 10 | > th | dose independent | rect. | 13 | 1 |
| 478 | 362.90 | wind | 1 | 10 | < th | dose independent | rect. | 24 | 2 |
| 493 | 362.93 | humidity | 90 | 1440 | > th | dose dependent | sin | 4 | NA |
| 495 | 362.93 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 15 |
| 537 | 363.06 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 542 | 363.08 | temperature | 25 | 270 | > th | dose dependent | sin | 9 | NA |
| 548 | 363.11 | wind | 1 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 577 | 363.16 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 6 |
| 598 | 363.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 17 |
| 640 | 363.31 | wind | 3 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 714 | 363.47 | wind | 1 | 720 | > th | dose independent | rect. | 5 | 9 |
| 747 | 363.54 | wind | 1 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 767 | 363.58 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 8 |
| 787 | 363.60 | wind | 1 | 1440 | > th | dose independent | no | NA | NA |
| 801 | 363.64 | wind | 1 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 805 | 363.65 | wind | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 849 | 363.73 | wind | 1 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 885 | 363.80 | wind | 1 | 1440 | > th | dose independent | sin | 2 | NA |
| 897 | 363.83 | wind | 1 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 906 | 363.86 | wind | 1 | 720 | > th | dose independent | rect. | 23 | 17 |
| 916 | 363.87 | wind | 3 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 945 | 363.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 9 |
| 963 | 363.95 | wind | 1 | 720 | > th | dose independent | rect. | 19 | 16 |
| 976 | 363.98 | wind | 1 | 1440 | < th | dose independent | sin | 2 | NA |
| 992 | 364.01 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |