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Os03g0818000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0144) R2 : 0.00644
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.052 (0.0303) R2dN8 : 0.00832 R2N8 : 0.00644
σ : 0.271
deviance : 33.64
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.32 0.171 11 0.661 0.417 0.501 -0.243 0.201 0.103 0.0871 25.48 994 -- --
13.36 0.17 11 0.691 0.405 0.482 -0.282 -- 0.111 0.127 25.75 1032 -- --
13.55 0.171 11 0.652 0.408 0.503 -- 0.31 0.0997 0.0996 25.43 1028 -- --
13.68 0.172 11 0.708 0.419 0.483 -- -- 0.116 0.0893 26.3 1031 -- --
17.29 0.195 11 0.778 -- 0.722 -- -0.518 0.127 -- 38.32 4578 -- --
16.78 0.192 11 0.556 0.35 -- -0.262 -- 0.0057 0.107 -- -- -- --
17.07 0.194 11 0.566 0.351 -- -- -- 0.00697 0.0783 -- -- -- --
17.52 0.196 11 0.707 -- 0.712 -- -- 0.107 -- 57.6 1636 -- --
25.08 0.235 11.1 -- 0.312 0.202 -- -- -0.0319 23.8 59 130 -- --
24.85 0.233 11 0.577 -- -- -- -- 0.012 -- -- -- -- --
25.52 0.236 11.1 -- 0.359 -- -- -- -0.0561 0.166 -- -- -- --
29.9 0.255 11 -- -- 0.499 -- -- 0.0039 -- 97.05 2 -- --
33.64 0.271 11.1 -- -- -- -- -- -0.052 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.65 temperature 20.0 270 > th dose dependent rect. 18 21
3 12.86 temperature 30.0 270 < th dose dependent rect. 22 21
8 12.93 temperature 20.0 270 > th dose dependent rect. 3 11
10 12.94 temperature 20.0 270 > th dose dependent sin 5 NA
13 12.96 temperature 30.0 270 < th dose dependent sin 4 NA
14 12.96 temperature 30.0 270 < th dose dependent rect. 23 18
33 13.10 wind 7.0 14400 > th dose dependent rect. 16 1
37 13.11 temperature 20.0 10 > th dose dependent rect. 21 20
39 13.12 temperature 20.0 10 > th dose dependent rect. 5 12
53 13.17 temperature 10.0 270 > th dose dependent sin 5 NA
61 13.19 humidity 50.0 14400 < th dose dependent rect. 10 2
71 13.22 temperature 20.0 720 > th dose dependent rect. 4 3
76 13.23 humidity 50.0 14400 < th dose independent rect. 11 1
100 13.27 wind 1.0 14400 < th dose dependent rect. 10 3
111 13.28 humidity 50.0 14400 < th dose dependent rect. 8 4
138 13.30 humidity 60.0 14400 < th dose independent rect. 8 1
141 13.30 temperature 20.0 4320 < th dose dependent rect. 1 1
165 13.31 radiation 10.0 4320 < th dose independent rect. 15 16
166 13.31 humidity 50.0 14400 < th dose dependent sin 8 NA
174 13.32 radiation 10.0 4320 < th dose independent rect. 11 20
201 13.33 temperature 20.0 10 > th dose dependent rect. 23 18
218 13.35 temperature 20.0 10 > th dose dependent sin 1 NA
221 13.35 humidity 60.0 14400 < th dose dependent rect. 7 2
255 13.37 wind 1.0 14400 > th dose independent rect. 11 2
275 13.38 humidity 50.0 14400 < th dose dependent rect. 13 1
299 13.40 precipitation 0.1 43200 > th dose independent rect. 23 1
304 13.40 precipitation 0.1 43200 > th dose dependent rect. 23 1
316 13.41 precipitation 0.1 43200 < th dose independent rect. 23 1
317 13.41 wind 1.0 14400 < th dose independent rect. 10 3
319 13.41 temperature 10.0 10 > th dose dependent sin 0 NA
324 13.41 atmosphere 1010.0 4320 > th dose dependent rect. 12 1
325 13.41 precipitation 0.1 43200 < th dose dependent rect. 23 1
352 13.43 temperature 20.0 1440 < th dose independent rect. 4 1
354 13.43 humidity 50.0 14400 < th dose independent rect. 8 5
382 13.44 temperature 20.0 1440 > th dose independent rect. 4 1
420 13.45 humidity 50.0 14400 > th dose independent rect. 11 2
423 13.45 radiation 1.0 4320 > th dose dependent rect. 4 2
446 13.46 radiation 10.0 4320 < th dose independent sin 13 NA
448 13.46 humidity 60.0 14400 > th dose independent rect. 8 1
473 13.46 radiation 40.0 4320 < th dose dependent rect. 3 3
478 13.46 temperature 20.0 10 > th dose dependent rect. 3 13
551 13.49 radiation 10.0 14400 > th dose dependent rect. 17 14
596 13.51 humidity 60.0 43200 < th dose independent rect. 17 1
598 13.51 humidity 50.0 14400 > th dose independent rect. 18 19
622 13.51 temperature 20.0 4320 < th dose dependent rect. 24 17
623 13.51 temperature 20.0 4320 < th dose dependent rect. 12 18
630 13.52 atmosphere 1015.0 14400 < th dose independent rect. 19 3
636 13.52 temperature 25.0 720 < th dose dependent no NA NA
637 13.52 humidity 50.0 14400 < th dose dependent no NA NA
638 13.52 atmosphere 1010.0 4320 > th dose dependent sin 22 NA
708 13.52 temperature 20.0 4320 < th dose dependent rect. 24 15
718 13.52 temperature 20.0 4320 < th dose dependent rect. 14 16
819 13.52 temperature 25.0 720 < th dose dependent rect. 13 23
839 13.53 atmosphere 1015.0 14400 > th dose independent rect. 19 3
842 13.53 atmosphere 1015.0 14400 < th dose independent rect. 17 8
871 13.53 temperature 20.0 4320 < th dose dependent rect. 24 13
913 13.53 temperature 25.0 720 < th dose dependent rect. 15 23
916 13.54 atmosphere 1015.0 14400 < th dose independent sin 14 NA
924 13.54 humidity 50.0 14400 > th dose independent rect. 8 5
955 13.54 atmosphere 1015.0 14400 < th dose independent rect. 10 16
960 13.54 atmosphere 1015.0 14400 < th dose independent rect. 7 17
990 13.54 atmosphere 1010.0 14400 > th dose dependent rect. 16 1