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Os03g0816300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.62 (0.0144) R2 : 0.625
β1 : 1.24 (0.0528) R2dD : 0.47 R2D : 0.408
β2 : 0.544 (0.0372) R2dC : 0.177 R2C : 0.156
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.21 (0.0308) R2dN8 : 0.0512 R2N8 : -0.0164
σ : 0.271
deviance : 33.56
__
_____
C
peak time of C : 19.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.41 0.259 9.57 1.72 0.669 -0.529 -0.373 3.88 0.325 18.9 25.93 437 -- --
33.03 0.268 9.6 1.37 0.546 -0.176 0.0401 -- 0.291 19.4 21.75 19166 -- --
30.65 0.258 9.57 1.69 0.661 -0.515 -- 3.66 0.304 19 26.31 437 -- --
33.01 0.268 9.6 1.33 0.546 -0.161 -- -- 0.287 19.4 22.6 19112 -- --
46.42 0.317 9.56 1.6 -- -0.0133 -- 3.69 0.29 -- 26.9 465 -- --
33.55 0.272 9.62 1.24 0.544 -- 0.0606 -- 0.21 19.3 -- -- -- --
33.56 0.271 9.62 1.24 0.544 -- -- -- 0.21 19.3 -- -- -- --
48.58 0.325 9.59 1.34 -- -0.139 -- -- 0.266 -- 26.82 28887 -- --
46.63 0.318 9.71 -- 0.54 0.841 -- -- -0.18 19.2 10.69 47520 -- --
49.27 0.328 9.61 1.23 -- -- -- -- 0.201 -- -- -- -- --
74.07 0.403 9.65 -- 0.532 -- -- -- 0.0719 19.5 -- -- -- --
62.08 0.367 9.7 -- -- 0.836 -- -- -0.187 -- 10.59 47520 -- --
89.22 0.441 9.64 -- -- -- -- -- 0.0644 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.92 humidity 90 1440 > th dose independent rect. 18 8
5 30.06 humidity 90 1440 > th dose independent rect. 23 1
13 30.16 humidity 80 1440 > th dose dependent rect. 13 17
29 30.25 wind 9 4320 < th dose independent rect. 4 5
33 30.28 humidity 90 1440 > th dose independent rect. 14 12
34 30.28 humidity 90 1440 > th dose dependent rect. 23 1
40 30.31 temperature 25 270 > th dose dependent rect. 10 11
42 30.32 humidity 90 1440 > th dose independent sin 15 NA
51 30.34 humidity 80 1440 > th dose dependent rect. 18 12
64 30.37 atmosphere 995 43200 < th dose independent rect. 15 7
67 30.37 temperature 30 270 < th dose dependent rect. 3 1
79 30.39 atmosphere 995 43200 > th dose independent rect. 15 7
85 30.40 humidity 80 1440 > th dose dependent sin 14 NA
96 30.42 humidity 90 1440 < th dose independent rect. 18 7
107 30.43 temperature 30 90 < th dose dependent rect. 3 4
120 30.45 humidity 90 1440 > th dose dependent rect. 22 3
122 30.45 humidity 50 1440 > th dose dependent rect. 19 11
132 30.46 humidity 90 1440 > th dose dependent rect. 18 8
137 30.47 temperature 25 270 > th dose dependent sin 19 NA
140 30.47 temperature 25 270 > th dose dependent rect. 10 21
180 30.51 temperature 25 270 > th dose dependent rect. 10 18
199 30.54 humidity 90 1440 < th dose independent rect. 18 10
242 30.59 humidity 90 1440 < th dose independent rect. 14 14
249 30.60 humidity 90 1440 < th dose independent sin 15 NA
250 30.60 humidity 90 1440 < th dose independent rect. 19 2
251 30.60 wind 1 43200 < th dose independent rect. 2 8
319 30.66 humidity 90 1440 < th dose independent rect. 14 11
331 30.67 temperature 25 720 > th dose dependent rect. 9 6
344 30.68 atmosphere 1000 43200 < th dose independent rect. 21 15
369 30.69 atmosphere 1000 43200 > th dose independent rect. 21 15
373 30.69 temperature 25 720 > th dose dependent rect. 10 4
379 30.70 humidity 90 1440 > th dose independent rect. 20 1
380 30.70 temperature 20 90 < th dose independent rect. 3 2
398 30.71 atmosphere 1000 43200 > th dose independent rect. 21 1
401 30.71 atmosphere 1000 43200 < th dose independent rect. 21 1
422 30.72 atmosphere 995 43200 > th dose independent rect. 16 1
425 30.72 temperature 20 90 < th dose independent rect. 2 4
439 30.72 temperature 20 90 < th dose dependent rect. 3 2
456 30.73 humidity 80 1440 > th dose dependent rect. 20 1
457 30.73 radiation 1 43200 < th dose dependent rect. 1 1
492 30.75 atmosphere 1000 43200 < th dose independent sin 7 NA
493 30.75 atmosphere 995 43200 < th dose independent rect. 16 1
510 30.75 atmosphere 995 43200 < th dose dependent rect. 16 1
521 30.76 atmosphere 1000 43200 > th dose independent sin 7 NA
547 30.76 temperature 20 270 < th dose dependent rect. 24 5
571 30.77 wind 9 4320 < th dose independent rect. 19 15
604 30.78 temperature 30 270 < th dose independent rect. 4 23
618 30.79 wind 1 270 > th dose independent rect. 3 1
626 30.79 atmosphere 995 43200 > th dose independent rect. 14 9
640 30.79 temperature 25 720 > th dose dependent rect. 11 2
648 30.79 wind 9 4320 > th dose dependent rect. 19 15
719 30.82 atmosphere 1000 43200 < th dose independent rect. 5 1
729 30.82 wind 9 4320 > th dose independent rect. 19 15
743 30.82 temperature 25 720 > th dose dependent rect. 6 9
753 30.83 atmosphere 1000 43200 > th dose independent rect. 5 1
754 30.83 radiation 10 14400 < th dose independent rect. 13 1
758 30.83 temperature 20 270 < th dose independent rect. 23 6
762 30.83 wind 9 4320 < th dose independent rect. 19 10
780 30.83 temperature 20 90 < th dose dependent rect. 2 4
790 30.84 wind 5 270 < th dose independent rect. 3 1
791 30.84 wind 3 14400 < th dose independent rect. 22 1
889 30.86 atmosphere 1000 43200 < th dose independent rect. 4 22
896 30.86 radiation 1 43200 < th dose dependent rect. 23 5
899 30.86 humidity 90 1440 < th dose dependent rect. 19 11
903 30.87 atmosphere 1000 43200 > th dose independent rect. 11 1
904 30.87 atmosphere 1000 43200 < th dose independent rect. 11 1
906 30.87 atmosphere 1000 43200 < th dose independent rect. 4 3
909 30.87 atmosphere 1000 43200 < th dose independent rect. 3 5
915 30.87 atmosphere 1000 43200 < th dose independent rect. 18 7
929 30.87 atmosphere 1000 43200 < th dose independent rect. 5 20
937 30.87 atmosphere 1000 43200 < th dose independent rect. 14 22
954 30.88 atmosphere 1000 43200 < th dose independent no NA NA
957 30.88 atmosphere 1000 43200 > th dose independent rect. 4 3
976 30.88 atmosphere 1000 43200 > th dose independent rect. 5 21
987 30.88 atmosphere 1000 43200 < th dose independent rect. 1 23