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Os03g0811800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ribosomal protein L36 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0121) R2 : 0.00278
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0287 (0.0255) R2dN8 : 0.00359 R2N8 : 0.00278
σ : 0.228
deviance : 23.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.86 0.193 12.3 -0.00767 0.33 -0.168 -0.094 0.025 0.00121 17.6 1015 7506 -- --
16.86 0.191 12.3 -0.0011 0.33 -0.167 -0.0878 -- 0.00345 17.6 1015 7505 -- --
16.88 0.191 12.3 -0.00829 0.33 -0.168 -- 0.0263 0.00122 17.6 1015 7505 -- --
16.89 0.191 12.3 0.000449 0.33 -0.169 -- -- 0.0027 17.6 1015 7505 -- --
22.53 0.221 12.3 -0.0149 -- -0.16 -- 0.0257 -0.00458 -- 1015 7469 -- --
18.08 0.199 12.3 0.0738 0.33 -- -0.0976 -- 0.0441 17.6 -- -- -- --
18.11 0.199 12.3 0.0742 0.329 -- -- -- 0.0437 17.5 -- -- -- --
22.52 0.221 12.3 -0.0255 -- -0.183 -- -- -0.0061 -- 1015 7454 -- --
16.89 0.191 12.3 -- 0.33 -0.169 -- -- 0.00252 17.6 1015 7505 -- --
23.73 0.228 12.3 0.0635 -- -- -- -- 0.0358 -- -- -- -- --
18.25 0.2 12.3 -- 0.328 -- -- -- 0.0355 17.6 -- -- -- --
22.54 0.221 12.3 -- -- -0.166 -- -- -0.00156 -- 1015 7505 -- --
23.84 0.228 12.3 -- -- -- -- -- 0.0287 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.32 temperature 10.0 30 > th dose dependent rect. 6 8
5 16.38 radiation 10.0 90 < th dose independent rect. 6 20
6 16.40 atmosphere 1005.0 43200 < th dose independent rect. 1 1
7 16.43 atmosphere 1005.0 43200 > th dose independent rect. 1 1
10 16.44 atmosphere 1005.0 43200 < th dose independent rect. 3 1
14 16.45 temperature 10.0 10 > th dose dependent rect. 6 21
15 16.46 atmosphere 1005.0 43200 > th dose independent rect. 3 1
46 16.51 atmosphere 1005.0 43200 > th dose independent rect. 11 1
47 16.51 atmosphere 1005.0 43200 < th dose independent rect. 11 1
86 16.58 temperature 20.0 30 > th dose independent rect. 6 8
121 16.63 atmosphere 1005.0 43200 < th dose independent sin 9 NA
124 16.63 radiation 1.0 4320 > th dose independent rect. 6 1
125 16.63 radiation 1.0 4320 < th dose independent rect. 6 1
138 16.63 atmosphere 1015.0 10 < th dose independent rect. 14 16
139 16.63 atmosphere 1005.0 43200 < th dose independent rect. 22 16
157 16.64 atmosphere 1005.0 43200 > th dose independent rect. 18 11
163 16.64 atmosphere 1005.0 43200 < th dose independent rect. 23 13
180 16.65 atmosphere 1005.0 43200 > th dose independent sin 9 NA
187 16.65 atmosphere 1005.0 43200 > th dose independent rect. 1 11
222 16.66 atmosphere 1005.0 43200 > th dose independent sin 7 NA
226 16.66 atmosphere 1005.0 43200 < th dose independent sin 5 NA
266 16.66 atmosphere 1005.0 43200 < th dose independent rect. 18 18
288 16.67 atmosphere 1005.0 43200 > th dose independent sin 5 NA
335 16.67 atmosphere 1005.0 43200 < th dose independent rect. 11 19
367 16.68 atmosphere 1005.0 43200 < th dose independent no NA NA
389 16.68 atmosphere 1005.0 43200 > th dose independent rect. 18 18
418 16.68 atmosphere 1005.0 43200 < th dose independent rect. 1 23
419 16.68 atmosphere 1005.0 43200 < th dose independent rect. 5 23
511 16.69 temperature 30.0 90 < th dose dependent rect. 1 18
514 16.69 radiation 20.0 10 < th dose dependent rect. 6 21
554 16.70 atmosphere 1005.0 43200 > th dose independent rect. 10 20
583 16.70 wind 1.0 43200 > th dose dependent rect. 1 2
587 16.71 atmosphere 1005.0 43200 > th dose independent no NA NA
661 16.72 atmosphere 1010.0 30 < th dose independent rect. 6 8
674 16.72 temperature 30.0 90 < th dose independent rect. 2 15
718 16.72 temperature 30.0 10 < th dose dependent rect. 2 18
731 16.73 wind 9.0 10 < th dose independent rect. 6 8
766 16.74 humidity 80.0 10 > th dose independent rect. 3 3
775 16.74 temperature 10.0 10 > th dose independent rect. 6 8
777 16.74 humidity 50.0 10 > th dose independent rect. 6 8
780 16.74 atmosphere 995.0 10 > th dose independent rect. 6 8
784 16.74 precipitation 0.1 10 < th dose independent rect. 6 8
795 16.74 temperature 10.0 10 > th dose independent rect. 14 16
798 16.74 radiation 40.0 10 < th dose independent rect. 14 16
814 16.74 atmosphere 1010.0 43200 < th dose dependent rect. 23 1
815 16.74 radiation 1.0 4320 < th dose dependent rect. 6 1
817 16.74 precipitation 0.1 10 < th dose dependent rect. 6 8
823 16.75 wind 9.0 14400 < th dose independent sin 6 NA
865 16.75 temperature 25.0 90 < th dose independent rect. 2 18
891 16.76 temperature 10.0 1440 > th dose independent rect. 7 8
911 16.76 wind 9.0 14400 > th dose independent rect. 23 14
915 16.76 temperature 10.0 1440 > th dose independent rect. 15 16
942 16.77 wind 9.0 14400 > th dose independent sin 6 NA
960 16.77 wind 9.0 14400 < th dose independent rect. 23 14
989 16.77 wind 7.0 270 < th dose dependent rect. 5 19
994 16.77 wind 9.0 90 < th dose dependent rect. 5 22
997 16.78 temperature 20.0 720 > th dose independent rect. 6 1