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Os03g0811500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : PAPA-1-like conserved region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0119) R2 : 0.0441
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.115 (0.0251) R2dN8 : 0.0569 R2N8 : 0.0441
σ : 0.225
deviance : 23.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.59 0.208 11.2 0.272 0.142 0.0095 -0.091 1.04 -0.0348 18.7 21.33 1855 -- --
21.55 0.216 11.3 0.114 0.136 -0.189 0.0507 -- -0.0585 18.9 18 10237 -- --
19.61 0.206 11.2 0.272 0.142 0.00845 -- 1.03 -0.0355 18.7 21.33 1846 -- --
21.07 0.214 11.3 0.151 0.144 -0.244 -- -- -0.0757 18.2 16.4 10497 -- --
20.66 0.212 11.2 0.267 -- 0.0187 -- 1.04 -0.0397 -- 21.3 1854 -- --
22.09 0.22 11.3 -0.0245 0.145 -- -0.0185 -- -0.115 18.6 -- -- -- --
22.09 0.22 11.3 -0.0242 0.145 -- -- -- -0.115 18.6 -- -- -- --
21.78 0.217 11.3 0.203 -- -0.307 -- -- -0.0515 -- 15.2 22917 -- --
20.93 0.213 11.3 -- 0.132 -0.348 -- -- -0.0981 18.8 16.8 2766 -- --
23.18 0.225 11.3 -0.0276 -- -- -- -- -0.118 -- -- -- -- --
22.1 0.22 11.3 -- 0.145 -- -- -- -0.113 18.6 -- -- -- --
21.91 0.218 11.3 -- -- -0.363 -- -- -0.0943 -- 16.8 2757 -- --
23.2 0.225 11.3 -- -- -- -- -- -0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.81 wind 7.0 270 < th dose independent rect. 15 10
2 18.27 temperature 20.0 30 > th dose independent rect. 12 6
4 18.28 wind 5.0 90 < th dose independent rect. 17 10
9 18.40 radiation 1.0 30 > th dose independent rect. 12 18
11 18.43 precipitation 0.1 270 < th dose independent rect. 1 14
12 18.43 temperature 15.0 270 > th dose independent rect. 11 19
13 18.43 wind 7.0 270 < th dose independent rect. 15 21
14 18.43 precipitation 0.1 270 < th dose dependent rect. 1 14
15 18.45 radiation 1.0 30 < th dose dependent sin 15 NA
16 18.46 temperature 25.0 270 < th dose independent rect. 23 7
17 18.46 temperature 15.0 30 > th dose dependent rect. 12 6
18 18.47 temperature 10.0 270 > th dose independent rect. 15 10
19 18.47 temperature 10.0 270 > th dose independent rect. 1 14
20 18.47 atmosphere 1015.0 270 < th dose independent rect. 1 14
22 18.47 temperature 30.0 270 < th dose dependent rect. 24 6
23 18.50 wind 9.0 270 < th dose independent rect. 1 14
24 18.50 temperature 15.0 270 > th dose independent rect. 12 17
27 18.52 temperature 20.0 270 > th dose dependent rect. 12 3
34 18.55 radiation 40.0 270 < th dose independent rect. 15 10
35 18.55 radiation 1.0 30 < th dose dependent rect. 15 12
38 18.56 humidity 90.0 90 < th dose independent rect. 12 6
42 18.57 temperature 30.0 270 < th dose dependent rect. 1 4
49 18.59 atmosphere 995.0 270 > th dose independent rect. 1 14
61 18.65 temperature 10.0 90 > th dose dependent rect. 18 18
62 18.66 radiation 1.0 30 > th dose independent rect. 12 7
75 18.66 wind 1.0 30 > th dose dependent rect. 12 6
76 18.67 radiation 1.0 270 > th dose independent rect. 17 19
87 18.70 temperature 20.0 270 > th dose dependent rect. 13 1
94 18.72 humidity 80.0 270 < th dose independent rect. 12 3
95 18.72 precipitation 0.1 270 < th dose independent rect. 15 10
99 18.72 radiation 20.0 90 < th dose dependent rect. 17 10
100 18.72 precipitation 0.1 270 < th dose dependent rect. 15 10
101 18.73 temperature 15.0 270 > th dose independent rect. 6 5
104 18.74 humidity 50.0 270 > th dose independent rect. 6 5
105 18.74 precipitation 0.1 270 < th dose independent rect. 11 19
106 18.74 temperature 15.0 270 > th dose independent rect. 10 21
115 18.74 precipitation 0.1 270 < th dose dependent rect. 11 19
116 18.75 radiation 1.0 90 > th dose independent rect. 6 6
123 18.76 atmosphere 995.0 270 > th dose independent rect. 6 5
124 18.76 atmosphere 1015.0 270 < th dose independent rect. 6 5
125 18.76 precipitation 0.1 270 < th dose independent rect. 6 5
130 18.76 precipitation 0.1 270 < th dose dependent rect. 6 5
131 18.76 temperature 15.0 90 > th dose dependent rect. 12 10
134 18.77 radiation 1.0 30 > th dose independent sin 15 NA
135 18.77 radiation 1.0 30 < th dose independent sin 15 NA
136 18.77 wind 7.0 270 < th dose independent rect. 6 5
158 18.80 humidity 50.0 90 > th dose independent rect. 17 10
159 18.80 radiation 1.0 30 < th dose independent rect. 15 12
161 18.80 wind 7.0 270 < th dose independent rect. 17 18
164 18.81 temperature 20.0 270 > th dose independent rect. 12 3
166 18.81 precipitation 0.1 90 < th dose independent rect. 3 14
169 18.81 precipitation 0.1 90 < th dose dependent rect. 3 14
172 18.82 atmosphere 1010.0 90 < th dose independent rect. 12 18
209 18.85 humidity 50.0 270 > th dose independent rect. 5 7
231 18.86 wind 9.0 270 < th dose independent rect. 5 7
234 18.86 wind 9.0 270 < th dose dependent rect. 15 10
239 18.87 temperature 20.0 270 > th dose independent rect. 13 1
240 18.87 humidity 90.0 270 < th dose independent rect. 13 1
241 18.87 wind 3.0 270 > th dose independent rect. 12 3
262 18.88 temperature 10.0 90 > th dose independent rect. 17 10
263 18.88 radiation 10.0 90 < th dose independent rect. 17 10
267 18.88 temperature 10.0 90 > th dose independent rect. 3 14
268 18.88 atmosphere 1015.0 90 < th dose independent rect. 3 14
298 18.90 wind 9.0 270 < th dose independent rect. 11 19
300 18.90 radiation 40.0 270 < th dose dependent rect. 15 10
308 18.91 wind 1.0 90 > th dose independent rect. 6 6
309 18.91 temperature 10.0 30 > th dose independent rect. 12 6
312 18.91 atmosphere 1015.0 30 < th dose independent rect. 12 6
313 18.91 precipitation 0.1 30 < th dose independent rect. 12 6
314 18.91 wind 9.0 30 < th dose independent rect. 18 18
315 18.91 temperature 10.0 30 > th dose independent rect. 18 18
316 18.91 atmosphere 995.0 30 > th dose independent rect. 18 18
320 18.91 precipitation 0.1 30 < th dose dependent rect. 12 6
323 18.92 wind 9.0 90 < th dose independent rect. 3 14
332 18.93 atmosphere 995.0 90 > th dose independent rect. 17 10
338 18.93 radiation 40.0 90 < th dose independent rect. 12 18
351 18.94 wind 9.0 30 < th dose independent rect. 12 6
356 18.94 wind 1.0 270 > th dose dependent rect. 12 3
361 18.94 temperature 10.0 270 > th dose dependent rect. 18 16
362 18.94 temperature 10.0 90 > th dose dependent rect. 12 18
378 18.95 radiation 1.0 10 > th dose dependent rect. 6 6
387 18.96 wind 3.0 270 > th dose independent rect. 13 1
388 18.96 wind 7.0 270 < th dose independent rect. 7 3
414 18.98 temperature 15.0 1440 > th dose independent rect. 13 6
416 18.98 atmosphere 995.0 270 > th dose independent rect. 11 19
420 18.99 temperature 15.0 270 > th dose independent rect. 7 3
426 18.99 radiation 1.0 30 < th dose independent rect. 15 10
440 19.00 humidity 50.0 270 > th dose independent rect. 7 3
441 19.00 temperature 30.0 270 < th dose independent rect. 6 5
447 19.00 wind 1.0 270 > th dose independent rect. 15 10
450 19.00 temperature 10.0 1440 > th dose independent rect. 19 18
453 19.00 atmosphere 995.0 1440 > th dose independent rect. 19 18
454 19.00 precipitation 0.1 270 < th dose independent rect. 10 21
459 19.00 temperature 10.0 90 > th dose dependent rect. 6 6
462 19.00 precipitation 0.1 270 < th dose dependent rect. 10 21
465 19.01 atmosphere 995.0 270 > th dose independent rect. 7 3
466 19.01 atmosphere 1015.0 270 < th dose independent rect. 7 3
467 19.01 precipitation 0.1 270 < th dose independent rect. 7 3
476 19.01 wind 5.0 90 < th dose independent rect. 6 21
478 19.01 precipitation 0.1 270 < th dose dependent rect. 7 3
489 19.02 radiation 1.0 10 > th dose independent rect. 7 5
502 19.02 wind 1.0 270 > th dose independent rect. 12 17
512 19.02 wind 1.0 90 > th dose dependent rect. 12 10
542 19.04 wind 1.0 270 > th dose independent rect. 11 19
553 19.05 precipitation 0.1 270 < th dose independent rect. 13 1
554 19.05 radiation 1.0 270 > th dose independent rect. 7 3
565 19.05 atmosphere 995.0 270 > th dose independent rect. 12 17
567 19.05 humidity 50.0 30 > th dose independent rect. 18 18
568 19.05 wind 5.0 90 > th dose independent rect. 12 20
571 19.05 precipitation 0.1 270 < th dose dependent rect. 13 1
584 19.06 wind 5.0 90 > th dose independent rect. 12 18
588 19.06 precipitation 0.1 30 < th dose independent rect. 18 18
590 19.06 wind 5.0 270 < th dose independent rect. 6 19
602 19.06 precipitation 0.1 30 < th dose dependent rect. 18 18
621 19.07 temperature 15.0 10 > th dose dependent rect. 23 13
624 19.08 precipitation 0.1 270 < th dose independent rect. 12 3
626 19.08 wind 3.0 30 > th dose independent rect. 12 6
628 19.08 temperature 20.0 90 > th dose independent rect. 12 10
633 19.08 precipitation 0.1 270 < th dose dependent rect. 12 3
680 19.10 temperature 15.0 10 > th dose independent rect. 12 21
702 19.12 temperature 10.0 1440 > th dose independent rect. 8 5
709 19.12 atmosphere 995.0 1440 > th dose independent rect. 8 5
720 19.12 temperature 10.0 1440 > th dose independent rect. 13 19
724 19.12 temperature 30.0 90 < th dose dependent rect. 3 4
735 19.13 atmosphere 995.0 270 > th dose independent rect. 15 10
737 19.13 wind 5.0 90 > th dose independent rect. 12 14
756 19.14 wind 1.0 270 > th dose independent rect. 7 3
765 19.14 humidity 60.0 10 > th dose independent rect. 18 9
766 19.14 wind 1.0 90 > th dose independent rect. 17 10
770 19.14 wind 5.0 90 < th dose independent rect. 8 17
779 19.15 atmosphere 1010.0 270 < th dose independent rect. 12 3
780 19.15 wind 9.0 10 < th dose independent rect. 7 5
790 19.15 atmosphere 995.0 30 > th dose independent rect. 12 6
801 19.15 wind 9.0 270 < th dose dependent rect. 6 5
805 19.15 temperature 10.0 90 > th dose dependent rect. 22 14
808 19.16 temperature 10.0 270 > th dose independent rect. 12 3
822 19.16 radiation 40.0 30 < th dose independent rect. 12 6
831 19.16 temperature 10.0 270 > th dose independent rect. 15 21
832 19.16 humidity 90.0 270 < th dose dependent rect. 12 3
854 19.17 wind 9.0 270 < th dose independent rect. 10 21
858 19.17 radiation 20.0 90 < th dose dependent rect. 17 8
862 19.17 radiation 40.0 10 < th dose dependent rect. 1 17
866 19.18 wind 9.0 270 < th dose independent rect. 12 3
876 19.18 atmosphere 1015.0 30 < th dose independent rect. 18 18
912 19.19 radiation 40.0 14400 < th dose dependent rect. 19 10
918 19.20 radiation 1.0 270 < th dose independent sin 7 NA
919 19.20 temperature 10.0 270 > th dose independent rect. 13 1
921 19.20 atmosphere 995.0 270 > th dose independent rect. 13 1
922 19.20 atmosphere 1010.0 270 < th dose independent rect. 13 1
954 19.20 temperature 10.0 270 > th dose independent rect. 14 23
956 19.20 temperature 10.0 10 > th dose dependent rect. 7 5
964 19.20 wind 1.0 90 > th dose dependent rect. 12 18
967 19.21 atmosphere 995.0 270 > th dose independent rect. 12 3
969 19.21 wind 1.0 270 > th dose independent rect. 24 6
990 19.22 radiation 1.0 270 > th dose independent sin 7 NA
991 19.22 wind 9.0 270 < th dose independent rect. 13 1