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Os03g0809700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Kinase associated protein phosphatase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.014) R2 : 0.621
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.8 (0.0352) R2dC : 0.429 R2C : 0.392
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.43 (0.0294) R2dN8 : 0.23 R2N8 : 0.192
σ : 0.264
deviance : 31.79
__
_____
C
peak time of C : 3.41
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.92 0.248 9.29 0.0985 0.863 -0.558 -0.0942 -0.777 0.397 3.19 23.09 22 -- --
28.62 0.251 9.3 0.0128 0.854 -0.439 -0.322 -- 0.378 3.2 23.42 38 -- --
27.94 0.246 9.29 0.107 0.864 -0.571 -- -0.845 0.399 3.19 23.03 21 -- --
28.96 0.252 9.3 0.0198 0.853 -0.437 -- -- 0.381 3.21 23.42 38 -- --
66.43 0.38 9.29 0.116 -- -0.511 -- 0.228 0.456 -- 14.97 128 -- --
31.15 0.262 9.29 0.107 0.799 -- -0.312 -- 0.441 3.4 -- -- -- --
31.46 0.263 9.29 0.113 0.798 -- -- -- 0.443 3.41 -- -- -- --
63.63 0.372 9.3 -0.0686 -- -0.616 -- -- 0.364 -- 22.81 1118 -- --
28.97 0.252 9.3 -- 0.854 -0.444 -- -- 0.378 3.21 23.42 38 -- --
67.22 0.383 9.29 0.146 -- -- -- -- 0.464 -- -- -- -- --
31.79 0.264 9.29 -- 0.8 -- -- -- 0.43 3.41 -- -- -- --
62.68 0.369 9.31 -- -- -0.534 -- -- 0.346 -- 26.7 1097 -- --
67.78 0.384 9.29 -- -- -- -- -- 0.448 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.80 precipitation 0.1 90 > th dose independent rect. 14 3
2 25.89 precipitation 0.1 90 > th dose dependent rect. 14 3
3 26.20 wind 1.0 30 < th dose dependent rect. 14 4
11 26.23 wind 1.0 30 < th dose independent rect. 15 1
12 26.23 humidity 90.0 90 > th dose independent rect. 14 1
16 26.23 wind 1.0 30 < th dose dependent rect. 15 1
17 26.23 humidity 90.0 90 > th dose dependent rect. 14 1
34 26.64 wind 1.0 30 < th dose independent rect. 12 4
46 26.78 wind 1.0 14400 < th dose independent rect. 4 4
48 26.79 wind 1.0 14400 < th dose dependent rect. 6 2
49 26.82 wind 1.0 14400 < th dose dependent rect. 2 6
50 26.83 wind 1.0 14400 < th dose dependent rect. 4 4
51 26.86 wind 1.0 14400 > th dose independent rect. 4 4
53 26.94 wind 1.0 14400 < th dose independent rect. 2 6
57 27.03 wind 1.0 14400 > th dose independent rect. 2 6
63 27.13 temperature 20.0 10 < th dose dependent rect. 22 2
69 27.15 wind 1.0 14400 > th dose independent rect. 22 10
84 27.22 wind 1.0 14400 < th dose independent rect. 23 9
115 27.30 wind 1.0 14400 < th dose independent rect. 2 9
138 27.35 wind 1.0 30 < th dose dependent rect. 12 4
174 27.42 temperature 25.0 10 < th dose dependent sin 13 NA
190 27.47 wind 1.0 14400 > th dose independent rect. 1 2
204 27.48 temperature 25.0 10 < th dose dependent rect. 17 11
221 27.51 wind 1.0 14400 > th dose independent rect. 16 16
222 27.51 wind 1.0 14400 < th dose independent rect. 16 16
233 27.52 temperature 25.0 90 < th dose dependent rect. 17 10
260 27.54 temperature 25.0 10 < th dose dependent rect. 13 15
287 27.58 wind 1.0 14400 > th dose independent sin 9 NA
313 27.59 wind 3.0 14400 < th dose dependent rect. 23 2
343 27.62 atmosphere 1010.0 720 < th dose independent rect. 18 3
359 27.63 wind 1.0 14400 < th dose independent sin 8 NA
362 27.63 humidity 90.0 4320 > th dose dependent rect. 8 1
389 27.65 atmosphere 1010.0 720 < th dose independent rect. 16 6
408 27.66 temperature 20.0 30 < th dose dependent rect. 23 11
416 27.67 atmosphere 1010.0 270 < th dose independent rect. 16 13
437 27.68 atmosphere 1010.0 720 < th dose independent rect. 10 11
531 27.73 wind 1.0 14400 > th dose dependent rect. 22 4
603 27.78 wind 1.0 14400 < th dose independent rect. 1 2
607 27.78 wind 1.0 14400 > th dose dependent rect. 23 2
655 27.81 temperature 15.0 270 > th dose independent rect. 16 13
668 27.82 atmosphere 1010.0 720 < th dose independent rect. 18 10
703 27.84 atmosphere 1010.0 720 < th dose independent rect. 10 18
705 27.84 humidity 80.0 14400 < th dose dependent rect. 8 1
716 27.85 wind 3.0 14400 < th dose independent rect. 23 2
722 27.85 humidity 80.0 4320 < th dose dependent rect. 11 1
739 27.86 humidity 60.0 14400 < th dose dependent rect. 12 1
789 27.90 wind 3.0 14400 > th dose independent rect. 23 2
860 27.94 humidity 80.0 4320 > th dose independent rect. 9 1
864 27.94 wind 1.0 14400 < th dose independent rect. 2 15
892 27.95 humidity 70.0 14400 < th dose independent rect. 7 3
901 27.95 precipitation 0.1 14400 > th dose dependent rect. 4 12
909 27.96 humidity 80.0 14400 > th dose independent rect. 13 1
922 27.96 precipitation 0.1 14400 > th dose independent rect. 4 13
943 27.97 humidity 70.0 14400 > th dose independent rect. 7 3
944 27.97 humidity 70.0 14400 > th dose independent rect. 4 6
947 27.97 precipitation 0.1 14400 < th dose independent rect. 4 13
952 27.97 wind 1.0 30 < th dose dependent rect. 10 6
964 27.97 precipitation 0.1 14400 < th dose dependent rect. 4 13