Os03g0808300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os03g0808300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.76 | 0.363 | 14.8 | 0.53 | 1.37 | 0.863 | -0.751 | 0.516 | 0.737 | 22.4 | 4.052 | 75 | -- | -- |
| 60.06 | 0.361 | 14.8 | 0.552 | 1.37 | 0.855 | -0.188 | -- | 0.738 | 22.4 | 4.02 | 72 | -- | -- |
| 60.17 | 0.361 | 14.8 | 0.561 | 1.37 | 0.845 | -- | -0.0439 | 0.738 | 22.5 | 4.073 | 69 | -- | -- |
| 60.18 | 0.361 | 14.8 | 0.559 | 1.38 | 0.842 | -- | -- | 0.738 | 22.5 | 4.05 | 69 | -- | -- |
| 92.81 | 0.449 | 14.7 | 0.565 | -- | 1.74 | -- | -0.129 | 0.822 | -- | 7.555 | 23 | -- | -- |
| 71.22 | 0.396 | 14.8 | 0.54 | 2.29 | -- | -0.0921 | -- | 0.676 | 23.3 | -- | -- | -- | -- |
| 71.25 | 0.395 | 14.8 | 0.543 | 2.29 | -- | -- | -- | 0.676 | 23.3 | -- | -- | -- | -- |
| 92.87 | 0.449 | 14.7 | 0.558 | -- | 1.72 | -- | -- | 0.78 | -- | 3.839 | 50 | -- | -- |
| 68.34 | 0.385 | 14.8 | -- | 1.4 | 0.825 | -- | -- | 0.677 | 22.6 | 4.59 | 66 | -- | -- |
| 400.03 | 0.935 | 14.7 | 0.6 | -- | -- | -- | -- | 0.697 | -- | -- | -- | -- | -- |
| 79.03 | 0.416 | 14.8 | -- | 2.3 | -- | -- | -- | 0.615 | 23.3 | -- | -- | -- | -- |
| 100.31 | 0.466 | 14.7 | -- | -- | 1.75 | -- | -- | 0.764 | -- | 8.45 | 26 | -- | -- |
| 409.53 | 0.945 | 14.8 | -- | -- | -- | -- | -- | 0.631 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.85 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 13 |
| 2 | 59.93 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 10 | 60.43 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 17 | 60.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 20 | 60.96 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 17 |
| 24 | 61.19 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 29 | 61.36 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 18 |
| 33 | 61.39 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 23 |
| 37 | 61.47 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 21 |
| 39 | 61.48 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 51 | 61.49 | radiation | 1.0 | 90 | > th | dose independent | no | NA | NA |
| 97 | 61.50 | radiation | 1.0 | 90 | < th | dose independent | no | NA | NA |
| 98 | 61.50 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 23 |
| 101 | 61.51 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 23 |
| 112 | 61.62 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 137 | 61.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 139 | 61.80 | radiation | 10.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 143 | 61.85 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 16 |
| 145 | 61.86 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 19 |
| 153 | 61.91 | temperature | 10.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 169 | 61.97 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 173 | 61.99 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 186 | 62.07 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 187 | 62.08 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 200 | 62.18 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 212 | 62.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 213 | 62.31 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 14 |
| 231 | 62.46 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 234 | 62.49 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 20 |
| 240 | 62.54 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 241 | 62.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 244 | 62.55 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 247 | 62.56 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 12 |
| 256 | 62.60 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 260 | 62.61 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 20 |
| 262 | 62.61 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 268 | 62.63 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 269 | 62.63 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 270 | 62.64 | radiation | 1.0 | 90 | < th | dose dependent | no | NA | NA |
| 274 | 62.64 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 277 | 62.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 294 | 62.70 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 11 |
| 296 | 62.71 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 307 | 62.74 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 308 | 62.75 | radiation | 20.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 309 | 62.75 | radiation | 20.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 315 | 62.77 | radiation | 10.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 321 | 62.78 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 326 | 62.79 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 337 | 62.81 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 350 | 62.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 12 |
| 359 | 62.87 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 370 | 62.89 | temperature | 25.0 | 30 | < th | dose independent | rect. | 24 | 20 |
| 392 | 62.95 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 394 | 62.96 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 395 | 62.96 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 23 |
| 423 | 63.00 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 425 | 63.00 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 430 | 63.00 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 459 | 63.05 | temperature | 25.0 | 30 | < th | dose independent | sin | 2 | NA |
| 468 | 63.06 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 12 |
| 488 | 63.09 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 515 | 63.13 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 525 | 63.14 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 526 | 63.14 | radiation | 40.0 | 720 | < th | dose independent | rect. | 19 | 14 |
| 537 | 63.16 | temperature | 30.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 541 | 63.17 | humidity | 60.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 546 | 63.18 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 561 | 63.22 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 5 |
| 562 | 63.22 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 567 | 63.22 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 5 |
| 570 | 63.23 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 571 | 63.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 573 | 63.23 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 574 | 63.23 | radiation | 1.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 580 | 63.23 | temperature | 10.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 581 | 63.23 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 594 | 63.24 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 5 |
| 595 | 63.24 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 5 |
| 596 | 63.24 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 600 | 63.24 | temperature | 10.0 | 720 | > th | dose independent | rect. | 12 | 19 |
| 611 | 63.26 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 642 | 63.31 | humidity | 50.0 | 720 | > th | dose independent | rect. | 7 | 5 |
| 649 | 63.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 651 | 63.32 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 660 | 63.34 | wind | 9.0 | 720 | < th | dose independent | rect. | 24 | 19 |
| 677 | 63.37 | temperature | 25.0 | 30 | > th | dose independent | sin | 1 | NA |
| 778 | 63.42 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 780 | 63.43 | wind | 1.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 784 | 63.44 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 785 | 63.45 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 10 |
| 793 | 63.48 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 12 |
| 799 | 63.49 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 863 | 63.58 | wind | 9.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 871 | 63.59 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 14 |
| 880 | 63.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 887 | 63.61 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 19 |
| 893 | 63.61 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 898 | 63.62 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 10 |
| 923 | 63.64 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 5 |
| 926 | 63.64 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 930 | 63.65 | wind | 1.0 | 720 | > th | dose independent | rect. | 7 | 5 |
| 931 | 63.65 | temperature | 10.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 932 | 63.65 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 933 | 63.65 | humidity | 50.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 935 | 63.65 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 21 | 10 |
| 938 | 63.65 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 941 | 63.66 | temperature | 10.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 942 | 63.66 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 9 | 10 |
| 943 | 63.66 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 944 | 63.66 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 945 | 63.66 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 989 | 63.72 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 21 |
| 996 | 63.73 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 19 |
| 1000 | 63.74 | radiation | 1.0 | 90 | > th | dose independent | sin | 0 | NA |