Os03g0807700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0807700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glutelin family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.68 | 0.256 | 2.87 | 0.00156 | 0.0375 | -2.06 | -0.174 | -3.36 | 0.0182 | 7.2 | 8.931 | 28 | -- | -- |
| 30.13 | 0.256 | 2.86 | -0.0183 | 0.0364 | -1.15 | -0.156 | -- | 0.0205 | 7.4 | 8.958 | 25 | -- | -- |
| 29.75 | 0.254 | 2.87 | -0.00313 | 0.0372 | -2.03 | -- | -3.31 | 0.0182 | 6.99 | 8.943 | 27 | -- | -- |
| 30.19 | 0.256 | 2.86 | -0.0218 | 0.0363 | -1.15 | -- | -- | 0.0203 | 7.02 | 8.957 | 26 | -- | -- |
| 29.83 | 0.254 | 2.87 | -0.00316 | -- | -2.02 | -- | -3.3 | 0.0186 | -- | 8.946 | 27 | -- | -- |
| 33.36 | 0.271 | 2.86 | -0.0863 | 0.035 | -- | -0.0996 | -- | -0.00459 | 11 | -- | -- | -- | -- |
| 33.4 | 0.271 | 2.86 | -0.0903 | 0.0355 | -- | -- | -- | -0.00492 | 11.1 | -- | -- | -- | -- |
| 30.26 | 0.256 | 2.86 | -0.0218 | -- | -1.14 | -- | -- | 0.0206 | -- | 8.935 | 25 | -- | -- |
| 30.2 | 0.256 | 2.85 | -- | 0.0362 | -1.16 | -- | -- | 0.0228 | 7.01 | 8.957 | 26 | -- | -- |
| 33.48 | 0.27 | 2.86 | -0.0911 | -- | -- | -- | -- | -0.00521 | -- | -- | -- | -- | -- |
| 33.62 | 0.271 | 2.86 | -- | 0.0364 | -- | -- | -- | 0.00514 | 11.3 | -- | -- | -- | -- |
| 30.27 | 0.256 | 2.86 | -- | -- | -1.15 | -- | -- | 0.0233 | -- | 8.931 | 25 | -- | -- |
| 33.7 | 0.271 | 2.86 | -- | -- | -- | -- | -- | 0.0049 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.48 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 29 | 27.89 | wind | 9 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 38 | 28.14 | wind | 9 | 30 | > th | dose dependent | sin | 6 | NA |
| 39 | 28.17 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 1 |
| 69 | 28.44 | wind | 9 | 30 | < th | dose independent | sin | 5 | NA |
| 137 | 28.70 | wind | 9 | 30 | > th | dose independent | rect. | 18 | 18 |
| 143 | 28.90 | wind | 9 | 30 | > th | dose independent | sin | 5 | NA |
| 202 | 29.44 | radiation | 10 | 90 | < th | dose independent | rect. | 10 | 1 |
| 208 | 29.51 | radiation | 10 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 211 | 29.60 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 259 | 29.92 | humidity | 80 | 10 | > th | dose independent | rect. | 10 | 1 |
| 266 | 29.96 | humidity | 80 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 272 | 30.15 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 489 | 30.70 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 505 | 30.72 | wind | 9 | 30 | > th | dose independent | no | NA | NA |
| 560 | 30.77 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 630 | 30.91 | radiation | 20 | 10 | < th | dose independent | rect. | 9 | 4 |
| 639 | 30.93 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 789 | 31.21 | radiation | 30 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 899 | 31.40 | humidity | 80 | 270 | > th | dose independent | rect. | 9 | 1 |