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Os03g0806600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0565) R2 : 0.269
β1 : -0.115 (0.284) R2dD : 0.000608 R2D : -0.0214
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.412 (0.302) R2dE : 0.00532 R2E : -0.0496
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 8.73 (1.08) R2dD*E : 0.331 R2D*E : 0.262
γ1 : 0.108 (0.125) R2dN8 : 0.00226 R2N8 : -7.3e-05
σ : 0.973
deviance : 436.23
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C
peak time of C : --
E
wheather : radiation
threshold : 0.783
memory length : 8639
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
420.42 0.963 11.8 -0.0671 0.289 0.55 -2.07 8.82 0.113 7.76 0.6698 8584 -- --
467.39 1.01 11.6 1.05 0.314 0.712 -1.96 -- 0.366 8.04 8.689 25841 -- --
431.36 0.967 11.8 -0.129 0.312 0.491 -- 9.03 0.122 7.76 0.78 8640 -- --
453.42 0.992 11.6 0.804 0.231 1.66 -- -- 0.659 8.77 8.681 25459 -- --
436.23 0.973 11.8 -0.115 -- 0.412 -- 8.73 0.108 -- 0.783 8639 -- --
495.93 1.04 11.6 1.77 0.272 -- -1.92 -- 0.497 7.52 -- -- -- --
501.53 1.05 11.6 1.74 0.372 -- -- -- 0.507 10.7 -- -- -- --
455.19 0.994 11.6 0.94 -- 1.52 -- -- 0.71 -- 8.67 25411 -- --
469.45 1.01 11.6 -- 0.2 1.91 -- -- 0.663 8.81 9.22 25422 -- --
510.09 1.06 11.6 1.73 -- -- -- -- 0.505 -- -- -- -- --
581.3 1.13 11.6 -- 0.361 -- -- -- 0.313 10.4 -- -- -- --
471.99 1.01 11.6 -- -- 1.98 -- -- 0.664 -- 9.2 25411 -- --
589.27 1.13 11.7 -- -- -- -- -- 0.312 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 390.51 wind 1.0 43200 < th dose dependent rect. 2 6
3 392.88 wind 1.0 43200 < th dose independent rect. 2 2
5 394.67 wind 1.0 43200 > th dose independent rect. 2 2
6 395.59 humidity 80.0 43200 < th dose dependent rect. 6 2
10 398.07 wind 3.0 43200 > th dose dependent rect. 7 1
11 398.29 wind 1.0 43200 < th dose independent rect. 2 6
12 398.33 temperature 20.0 43200 < th dose independent rect. 21 1
14 398.54 temperature 20.0 43200 > th dose independent rect. 20 1
16 398.63 wind 1.0 43200 > th dose independent rect. 10 1
25 399.93 wind 1.0 43200 > th dose independent rect. 2 6
29 400.37 radiation 40.0 43200 < th dose dependent rect. 19 10
31 400.61 wind 3.0 43200 > th dose dependent rect. 6 3
34 400.73 humidity 90.0 14400 > th dose dependent rect. 5 1
37 400.84 wind 3.0 14400 > th dose independent rect. 13 1
39 400.96 wind 1.0 43200 < th dose independent rect. 10 1
44 401.48 wind 3.0 14400 < th dose independent rect. 13 1
56 402.26 wind 1.0 43200 < th dose independent rect. 23 7
66 402.95 wind 1.0 43200 < th dose dependent rect. 2 2
89 404.23 wind 1.0 43200 > th dose independent rect. 23 7
92 404.44 wind 5.0 14400 < th dose dependent rect. 13 2
93 404.45 wind 9.0 43200 < th dose independent rect. 19 10
123 405.54 wind 9.0 43200 < th dose dependent rect. 7 1
136 405.83 humidity 80.0 43200 > th dose dependent rect. 12 1
157 406.53 temperature 25.0 43200 < th dose dependent rect. 10 1
181 407.28 wind 5.0 43200 < th dose independent rect. 6 3
185 407.35 wind 5.0 43200 > th dose independent rect. 5 5
188 407.42 wind 5.0 43200 < th dose independent rect. 7 1
189 407.42 wind 5.0 43200 > th dose independent rect. 6 3
192 407.51 radiation 1.0 14400 < th dose independent rect. 18 11
195 407.61 wind 5.0 43200 < th dose independent rect. 5 5
198 407.64 wind 9.0 43200 < th dose independent rect. 19 6
201 407.67 precipitation 0.1 43200 > th dose independent rect. 15 5
202 407.67 wind 9.0 43200 > th dose dependent rect. 19 11
212 407.85 radiation 10.0 14400 > th dose independent rect. 5 2
227 407.89 wind 5.0 43200 > th dose independent rect. 7 1
237 407.96 wind 9.0 43200 > th dose independent rect. 19 11
240 408.08 precipitation 0.1 43200 > th dose independent rect. 13 7
248 408.17 temperature 20.0 43200 > th dose independent sin 18 NA
252 408.26 precipitation 0.1 43200 > th dose dependent rect. 13 7
257 408.30 temperature 20.0 14400 < th dose independent rect. 24 1
268 408.47 wind 9.0 43200 < th dose dependent rect. 3 6
283 408.67 precipitation 0.1 43200 < th dose independent rect. 15 5
284 408.67 precipitation 0.1 43200 < th dose dependent rect. 15 5
307 409.03 temperature 30.0 14400 < th dose dependent rect. 20 1
308 409.06 temperature 10.0 14400 > th dose dependent rect. 20 1
309 409.07 precipitation 0.1 43200 < th dose independent rect. 13 7
311 409.07 precipitation 0.1 43200 < th dose dependent rect. 13 7
314 409.13 temperature 25.0 43200 < th dose dependent rect. 9 9
325 409.25 humidity 70.0 43200 > th dose dependent rect. 20 2
374 409.72 temperature 20.0 43200 < th dose independent sin 18 NA
379 409.77 humidity 90.0 43200 < th dose independent rect. 10 1
380 409.78 radiation 1.0 14400 > th dose independent rect. 18 1
409 409.91 wind 9.0 43200 > th dose independent rect. 19 6
416 409.96 radiation 1.0 14400 < th dose independent rect. 18 8
417 409.99 humidity 80.0 43200 > th dose independent rect. 6 1
418 409.99 radiation 1.0 14400 < th dose independent rect. 18 4
419 409.99 radiation 1.0 14400 < th dose independent rect. 18 6
420 409.99 temperature 25.0 43200 < th dose dependent rect. 16 1
422 409.99 humidity 70.0 43200 > th dose dependent rect. 18 6
434 410.08 humidity 80.0 43200 < th dose independent rect. 6 1
447 410.17 precipitation 0.1 43200 > th dose dependent rect. 16 1
460 410.26 wind 1.0 43200 > th dose independent rect. 11 13
463 410.29 humidity 70.0 43200 > th dose dependent rect. 19 4
544 410.91 temperature 10.0 14400 > th dose dependent rect. 18 8
549 410.94 temperature 10.0 14400 > th dose dependent rect. 19 6
555 410.99 temperature 30.0 14400 < th dose dependent rect. 18 8
562 411.02 wind 9.0 43200 > th dose dependent rect. 19 6
565 411.03 wind 1.0 43200 > th dose independent rect. 13 12
577 411.07 humidity 90.0 14400 > th dose dependent rect. 3 6
624 411.24 temperature 10.0 14400 > th dose dependent rect. 18 16
625 411.25 temperature 20.0 14400 > th dose independent rect. 24 1
634 411.28 radiation 10.0 14400 < th dose independent rect. 13 1
642 411.30 temperature 30.0 14400 < th dose dependent rect. 18 16
661 411.40 temperature 30.0 14400 < th dose dependent rect. 13 20
665 411.41 temperature 30.0 14400 < th dose dependent rect. 13 15
707 411.54 temperature 30.0 14400 < th dose dependent sin 14 NA
719 411.57 temperature 10.0 14400 > th dose dependent rect. 18 20
726 411.59 temperature 10.0 14400 > th dose dependent rect. 7 1
734 411.60 temperature 30.0 14400 < th dose dependent rect. 18 21
778 411.70 temperature 10.0 14400 > th dose dependent sin 14 NA
784 411.71 temperature 10.0 14400 > th dose dependent rect. 13 15
786 411.72 humidity 90.0 14400 > th dose dependent rect. 4 3
790 411.72 temperature 10.0 14400 > th dose dependent rect. 13 20
902 411.92 humidity 90.0 14400 > th dose dependent rect. 1 9
934 411.98 wind 7.0 43200 < th dose dependent rect. 4 2
958 412.03 precipitation 0.1 43200 > th dose independent rect. 16 1
979 412.05 temperature 10.0 14400 > th dose dependent rect. 24 11