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Os03g0805600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0208) R2 : 0.691
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.67 (0.0525) R2dC : 0.692 R2C : 0.684
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.123 (0.0437) R2dN8 : 0.00695 R2N8 : -0.00066
σ : 0.392
deviance : 70.09
__
_____
C
peak time of C : 8.39
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.65 0.35 13.9 -0.388 2.13 1.07 0.726 -0.134 -0.129 10.8 0.0004879 301 -- --
55.57 0.347 13.9 -0.415 2.1 1.06 0.838 -- -0.128 10.8 0.02984 314 -- --
56.84 0.351 13.9 -0.319 2.09 1.09 -- -0.491 -0.102 10.8 0.0002372 322 -- --
58.51 0.356 13.9 -0.386 2.07 1.02 -- -- -0.129 10.7 0.0353 314 -- --
83.46 0.425 13.9 -0.444 -- 2.14 -- 0.722 -0.0787 -- 4.304 947 -- --
62.02 0.369 13.9 -0.506 1.68 -- 0.786 -- -0.176 8.41 -- -- -- --
63.96 0.375 13.9 -0.482 1.68 -- -- -- -0.177 8.37 -- -- -- --
72.06 0.395 13.9 -0.158 -- 2.51 -- -- -0.0716 -- 0.1713 1014 -- --
62.15 0.367 13.9 -- 2.11 1.05 -- -- -0.123 10.8 4.984e-07 309 -- --
220.32 0.694 14 -0.473 -- -- -- -- -0.159 -- -- -- -- --
70.09 0.392 13.9 -- 1.67 -- -- -- -0.123 8.39 -- -- -- --
71.84 0.395 13.9 -- -- 2.59 -- -- -0.00547 -- 0.05011 1000 -- --
226.22 0.702 14 -- -- -- -- -- -0.107 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.18 temperature 20.0 90 > th dose dependent rect. 17 6
2 43.19 temperature 25.0 90 > th dose independent rect. 17 6
3 43.26 temperature 25.0 270 > th dose independent rect. 15 6
6 44.02 temperature 25.0 270 > th dose independent rect. 16 4
13 44.52 temperature 15.0 270 > th dose dependent rect. 15 6
39 45.99 temperature 25.0 30 > th dose dependent rect. 18 14
162 49.04 radiation 1.0 270 > th dose independent rect. 17 13
167 49.14 humidity 90.0 30 < th dose independent rect. 17 6
171 49.25 temperature 10.0 1440 > th dose independent rect. 24 6
174 49.25 temperature 30.0 1440 < th dose independent rect. 24 6
178 49.25 humidity 50.0 1440 > th dose independent rect. 24 6
187 49.25 atmosphere 995.0 1440 > th dose independent rect. 24 6
188 49.25 radiation 20.0 1440 < th dose independent rect. 24 6
197 49.25 temperature 10.0 1440 > th dose independent rect. 6 18
214 49.41 temperature 10.0 90 > th dose dependent rect. 5 18
215 49.45 wind 5.0 90 < th dose independent rect. 16 7
233 49.64 humidity 90.0 270 < th dose independent rect. 15 6
236 49.66 radiation 1.0 270 > th dose independent rect. 16 15
241 49.72 wind 9.0 90 < th dose independent rect. 23 17
249 49.80 radiation 1.0 270 > th dose independent rect. 17 1
252 49.83 temperature 25.0 90 > th dose independent rect. 16 15
253 49.83 precipitation 0.1 90 < th dose independent rect. 5 18
255 49.83 precipitation 0.1 90 < th dose dependent rect. 5 18
256 49.84 wind 7.0 90 < th dose independent rect. 23 6
257 49.86 precipitation 0.1 90 < th dose independent rect. 16 7
258 49.86 precipitation 0.1 90 < th dose dependent rect. 16 7
262 49.89 wind 1.0 30 > th dose independent rect. 5 18
264 49.90 temperature 30.0 90 < th dose independent rect. 23 17
266 49.91 atmosphere 1015.0 90 < th dose independent rect. 5 18
268 49.91 radiation 10.0 30 < th dose dependent rect. 23 7
269 49.92 radiation 1.0 270 < th dose dependent sin 12 NA
278 49.96 radiation 1.0 90 < th dose independent rect. 23 6
285 49.98 temperature 10.0 90 > th dose independent rect. 23 6
286 49.98 temperature 30.0 90 < th dose independent rect. 23 6
287 49.98 humidity 50.0 90 > th dose independent rect. 23 6
290 49.98 atmosphere 995.0 90 > th dose independent rect. 23 6
294 49.98 temperature 10.0 90 > th dose independent rect. 5 18
304 50.01 precipitation 0.1 90 < th dose independent rect. 23 6
305 50.01 precipitation 0.1 90 < th dose dependent rect. 23 6
307 50.04 temperature 15.0 90 > th dose independent rect. 23 17
310 50.06 temperature 10.0 90 > th dose dependent rect. 23 6
311 50.07 radiation 1.0 270 < th dose independent sin 12 NA
313 50.08 radiation 10.0 10 < th dose independent rect. 23 7
320 50.11 temperature 10.0 90 > th dose independent rect. 16 7
321 50.11 radiation 40.0 90 < th dose independent rect. 16 7
327 50.13 atmosphere 995.0 90 > th dose independent rect. 16 7
333 50.17 atmosphere 995.0 90 > th dose independent rect. 23 17
337 50.20 atmosphere 1015.0 90 < th dose independent rect. 16 7
340 50.21 temperature 30.0 270 < th dose independent rect. 21 18
343 50.23 wind 1.0 90 > th dose independent rect. 16 7
344 50.23 wind 9.0 90 < th dose independent rect. 16 7
346 50.24 precipitation 0.1 90 < th dose independent rect. 23 17
347 50.24 precipitation 0.1 90 < th dose dependent rect. 23 17
381 50.42 radiation 40.0 90 < th dose dependent rect. 16 7
390 50.47 wind 9.0 270 < th dose independent rect. 21 18
396 50.49 temperature 15.0 270 > th dose independent rect. 8 8
418 50.60 precipitation 0.1 90 < th dose independent rect. 5 16
420 50.60 precipitation 0.1 90 < th dose dependent rect. 5 16
422 50.61 wind 9.0 90 < th dose independent rect. 5 18
428 50.63 radiation 1.0 270 > th dose independent sin 12 NA
432 50.64 atmosphere 995.0 90 > th dose independent rect. 5 18
449 50.72 precipitation 0.1 270 < th dose independent rect. 16 16
454 50.72 precipitation 0.1 270 < th dose dependent rect. 16 16
468 50.76 wind 9.0 270 < th dose independent rect. 8 8
477 50.79 radiation 1.0 90 < th dose independent rect. 21 8
480 50.80 wind 7.0 270 < th dose independent rect. 20 8
482 50.80 temperature 10.0 90 > th dose independent rect. 21 8
483 50.80 temperature 30.0 90 < th dose independent rect. 21 8
484 50.80 humidity 50.0 90 > th dose independent rect. 21 8
487 50.80 atmosphere 995.0 90 > th dose independent rect. 21 8
491 50.80 temperature 10.0 90 > th dose independent rect. 5 16
492 50.80 atmosphere 1015.0 90 < th dose independent rect. 5 16
493 50.80 atmosphere 995.0 90 > th dose dependent rect. 16 7
496 50.80 radiation 20.0 90 < th dose dependent rect. 21 8
503 50.81 temperature 10.0 270 > th dose independent rect. 21 18
531 50.82 humidity 50.0 90 > th dose independent rect. 23 17
550 50.87 atmosphere 995.0 270 > th dose independent rect. 21 18
554 50.88 wind 5.0 270 < th dose independent rect. 17 2
557 50.88 wind 9.0 270 < th dose independent rect. 16 16
561 50.88 wind 9.0 90 < th dose dependent rect. 16 7
563 50.89 atmosphere 1015.0 270 < th dose independent rect. 8 8
564 50.89 temperature 10.0 270 > th dose independent rect. 16 16
565 50.89 precipitation 0.1 270 < th dose independent rect. 21 18
566 50.89 precipitation 0.1 270 < th dose dependent rect. 21 18
568 50.90 humidity 60.0 270 > th dose independent rect. 21 18
569 50.90 radiation 1.0 30 < th dose dependent rect. 23 18
575 50.93 radiation 40.0 270 < th dose independent rect. 16 16
586 50.96 radiation 1.0 30 < th dose independent rect. 23 18
591 50.99 precipitation 0.1 90 < th dose independent rect. 21 8
593 50.99 temperature 25.0 10 > th dose dependent sin 11 NA
597 50.99 precipitation 0.1 90 < th dose dependent rect. 21 8
608 51.03 precipitation 0.1 270 < th dose independent rect. 8 8
612 51.03 precipitation 0.1 270 < th dose dependent rect. 8 8
614 51.04 radiation 10.0 30 < th dose independent rect. 6 17
620 51.08 temperature 25.0 90 > th dose dependent sin 12 NA
636 51.12 wind 9.0 270 < th dose independent rect. 4 16
677 51.16 atmosphere 995.0 270 > th dose independent rect. 16 16
692 51.20 wind 9.0 90 < th dose dependent rect. 23 6
694 51.20 radiation 1.0 30 < th dose dependent rect. 23 13
713 51.24 temperature 15.0 270 > th dose independent rect. 9 6
717 51.25 atmosphere 1015.0 90 < th dose independent rect. 23 17
723 51.27 precipitation 0.1 270 < th dose independent rect. 3 18
726 51.27 precipitation 0.1 270 < th dose dependent rect. 3 18
727 51.28 atmosphere 1015.0 90 < th dose independent rect. 23 6
759 51.34 wind 1.0 270 > th dose independent rect. 8 8
764 51.35 wind 7.0 270 < th dose independent rect. 21 6
774 51.36 temperature 10.0 1440 > th dose independent rect. 22 8
777 51.36 temperature 30.0 1440 < th dose independent rect. 22 8
781 51.36 humidity 50.0 1440 > th dose independent rect. 22 8
788 51.36 atmosphere 995.0 1440 > th dose independent rect. 22 8
789 51.36 radiation 20.0 1440 < th dose independent rect. 22 8
799 51.36 temperature 10.0 1440 > th dose independent rect. 6 16
821 51.38 atmosphere 995.0 270 > th dose independent rect. 8 8
826 51.40 temperature 30.0 270 < th dose independent rect. 10 5
833 51.41 atmosphere 1015.0 270 < th dose independent rect. 3 18
835 51.42 wind 9.0 270 < th dose independent rect. 9 6
846 51.42 atmosphere 995.0 90 > th dose independent rect. 5 16
855 51.44 radiation 1.0 30 < th dose independent rect. 23 13
869 51.47 temperature 10.0 270 > th dose independent rect. 21 6
870 51.47 temperature 30.0 270 < th dose independent rect. 21 6
871 51.47 humidity 50.0 270 > th dose independent rect. 21 6
874 51.47 atmosphere 995.0 270 > th dose independent rect. 21 6
875 51.47 radiation 1.0 270 < th dose independent rect. 21 6
886 51.47 temperature 10.0 270 > th dose independent rect. 3 18
889 51.47 radiation 1.0 270 < th dose dependent rect. 21 6
934 51.51 precipitation 0.1 270 < th dose independent rect. 21 6
958 51.51 precipitation 0.1 270 < th dose dependent rect. 21 6
967 51.52 precipitation 0.1 270 < th dose independent rect. 15 18
971 51.52 precipitation 0.1 270 < th dose dependent rect. 15 18
974 51.53 humidity 50.0 90 > th dose dependent rect. 23 6
987 51.55 wind 9.0 270 < th dose independent rect. 15 18
997 51.57 atmosphere 1015.0 270 < th dose independent rect. 9 6