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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0804900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.6 (0.0389) R2 : 0.398
β1 : 0.987 (0.142) R2dD : 0.0661 R2D : 0.0571
β2 : 1.53 (0.0965) R2dC : 0.335 R2C : 0.329
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.218 (0.0828) R2dN8 : 0.0122 R2N8 : -0.00315
σ : 0.73
deviance : 242.81
__
_____
C
peak time of C : 20.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
212.71 0.685 3.6 1.23 1.54 3.46 2.26 4.51 0.267 21.1 9.083 26 -- --
213.4 0.68 3.59 1.2 1.55 2.34 2.15 -- 0.269 21.1 9.146 19 -- --
230.41 0.707 3.61 1.14 1.53 3.03 -- 2.98 0.256 21.1 9.003 25 -- --
228.63 0.704 3.59 1.13 1.54 2.54 -- -- 0.271 21.1 9.1 18 -- --
365.25 0.89 3.55 1.13 -- 2.45 -- 1.13 0.26 -- 9.085 28 -- --
226.05 0.705 3.6 1.06 1.54 -- 2.21 -- 0.218 21 -- -- -- --
242.81 0.73 3.6 0.987 1.53 -- -- -- 0.218 20.9 -- -- -- --
365.27 0.89 3.55 1.12 -- 2.16 -- -- 0.257 -- 9.098 27 -- --
261.31 0.753 3.62 -- 1.58 1.82 -- -- 0.159 21.1 9.111 18 -- --
376.92 0.907 3.56 0.988 -- -- -- -- 0.207 -- -- -- -- --
268.49 0.766 3.62 -- 1.53 -- -- -- 0.108 21 -- -- -- --
393.53 0.924 3.58 -- -- 1.93 -- -- 0.113 -- 10 11 -- --
402.65 0.937 3.58 -- -- -- -- -- 0.0975 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 201.01 wind 9.0 30 > th dose dependent sin 7 NA
3 201.94 wind 9.0 30 > th dose dependent rect. 21 17
7 201.97 wind 9.0 30 > th dose dependent rect. 21 15
16 202.32 wind 9.0 30 > th dose dependent rect. 1 11
34 202.44 wind 9.0 30 > th dose dependent rect. 11 1
78 203.90 wind 9.0 30 < th dose independent sin 6 NA
80 204.32 wind 9.0 30 > th dose independent sin 6 NA
85 204.80 wind 9.0 30 > th dose independent rect. 11 3
88 205.02 wind 9.0 30 > th dose independent rect. 21 17
92 205.10 wind 9.0 30 > th dose independent rect. 1 13
100 205.19 wind 9.0 30 > th dose independent rect. 11 1
200 207.13 temperature 25.0 270 > th dose independent rect. 15 5
203 207.34 temperature 15.0 270 > th dose dependent rect. 15 6
246 208.11 temperature 20.0 270 > th dose dependent rect. 16 4
264 208.83 humidity 50.0 270 > th dose dependent rect. 12 13
278 209.52 precipitation 0.1 270 < th dose independent rect. 1 20
279 209.52 precipitation 0.1 270 < th dose dependent rect. 1 20
288 209.77 precipitation 0.1 270 < th dose independent rect. 24 23
290 209.77 precipitation 0.1 270 < th dose dependent rect. 24 23
335 210.53 temperature 25.0 10 > th dose independent rect. 16 7
364 210.84 wind 1.0 270 > th dose independent rect. 21 4
372 210.95 radiation 10.0 10 < th dose independent rect. 12 1
394 211.23 humidity 90.0 270 < th dose independent rect. 15 5
400 211.27 wind 7.0 270 < th dose independent rect. 21 4
401 211.28 humidity 70.0 270 > th dose independent rect. 12 14
414 211.40 precipitation 0.1 270 < th dose independent rect. 16 14
415 211.40 precipitation 0.1 270 < th dose dependent rect. 16 14
416 211.41 temperature 10.0 270 > th dose independent rect. 21 4
417 211.41 temperature 30.0 270 < th dose independent rect. 21 4
418 211.41 humidity 50.0 270 > th dose independent rect. 21 4
421 211.41 atmosphere 995.0 270 > th dose independent rect. 21 4
422 211.41 radiation 1.0 270 < th dose independent rect. 21 4
427 211.41 temperature 10.0 270 > th dose independent rect. 1 20
429 211.41 radiation 10.0 270 < th dose dependent rect. 21 4
444 211.51 precipitation 0.1 270 < th dose independent rect. 2 18
445 211.51 precipitation 0.1 270 < th dose dependent rect. 2 18
465 211.72 wind 7.0 270 < th dose independent rect. 21 18
480 211.79 humidity 50.0 270 > th dose dependent rect. 21 4
490 211.82 atmosphere 1015.0 270 < th dose independent rect. 1 20
491 211.83 precipitation 0.1 270 < th dose independent rect. 21 4
493 211.83 precipitation 0.1 270 < th dose dependent rect. 21 4
527 211.90 temperature 30.0 720 < th dose dependent rect. 14 1
549 211.95 temperature 15.0 10 > th dose dependent rect. 16 7
555 212.00 wind 9.0 270 < th dose independent rect. 1 20
575 212.15 temperature 30.0 90 < th dose dependent rect. 3 8
579 212.19 temperature 30.0 270 < th dose dependent rect. 1 8
586 212.25 atmosphere 1015.0 270 < th dose independent rect. 21 4
606 212.42 temperature 30.0 270 < th dose dependent rect. 12 13
617 212.50 temperature 25.0 10 > th dose independent rect. 16 14
618 212.52 wind 1.0 90 > th dose independent rect. 21 6
621 212.53 wind 7.0 270 < th dose independent rect. 6 10
638 212.62 temperature 30.0 270 < th dose independent rect. 12 13
648 212.68 precipitation 0.1 270 < th dose independent rect. 15 6
650 212.68 precipitation 0.1 270 < th dose dependent rect. 15 6
651 212.69 atmosphere 1015.0 270 < th dose dependent rect. 13 8
652 212.70 humidity 50.0 10 > th dose dependent rect. 12 15
653 212.71 wind 7.0 90 < th dose independent rect. 21 6
663 212.74 wind 1.0 270 > th dose independent rect. 1 20
668 212.76 temperature 10.0 270 > th dose independent rect. 22 2
669 212.76 temperature 30.0 270 < th dose independent rect. 22 2
670 212.76 humidity 50.0 270 > th dose independent rect. 22 2
673 212.76 atmosphere 995.0 270 > th dose independent rect. 22 2
674 212.76 radiation 1.0 270 < th dose independent rect. 22 2
679 212.76 temperature 10.0 270 > th dose independent rect. 24 22
680 212.76 radiation 1.0 270 < th dose dependent rect. 22 2
688 212.77 humidity 50.0 90 > th dose dependent rect. 21 6
710 212.79 temperature 25.0 270 > th dose dependent rect. 15 15
715 212.81 temperature 10.0 270 > th dose dependent rect. 22 2
723 212.84 humidity 90.0 270 < th dose dependent rect. 16 5
726 212.85 temperature 10.0 270 > th dose dependent rect. 21 4
758 212.94 temperature 10.0 90 > th dose independent rect. 3 19
759 212.94 atmosphere 1015.0 90 < th dose independent rect. 3 19
766 212.95 precipitation 0.1 270 < th dose independent rect. 22 2
771 212.95 precipitation 0.1 270 < th dose dependent rect. 22 2
808 213.02 atmosphere 1015.0 270 < th dose dependent rect. 15 5
810 213.03 atmosphere 1015.0 270 < th dose independent rect. 22 2
815 213.05 temperature 10.0 10 > th dose dependent rect. 23 5
822 213.08 wind 7.0 270 < th dose independent rect. 15 5
880 213.16 radiation 1.0 270 > th dose independent rect. 16 13
885 213.18 atmosphere 995.0 270 > th dose independent rect. 6 10
888 213.20 radiation 20.0 30 < th dose independent rect. 3 20
903 213.26 radiation 20.0 10 < th dose dependent rect. 4 19
905 213.28 radiation 1.0 270 > th dose independent rect. 16 3
917 213.28 precipitation 0.1 10 < th dose independent rect. 4 18
919 213.28 precipitation 0.1 10 < th dose dependent rect. 4 18
937 213.34 radiation 1.0 270 > th dose independent rect. 17 1
986 213.41 wind 1.0 10 > th dose independent rect. 4 18