Os03g0804300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os03g0804300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.25 | 0.316 | 9.29 | 0.319 | 0.609 | 1.4 | -0.88 | -0.284 | -0.0968 | 7.46 | 16.12 | 362 | -- | -- |
| 45.3 | 0.313 | 9.28 | 0.358 | 0.614 | 1.42 | -0.819 | -- | -0.0867 | 7.49 | 15.67 | 368 | -- | -- |
| 47.1 | 0.32 | 9.27 | 0.385 | 0.623 | 1.55 | -- | 0.381 | -0.0802 | 7.29 | 13.02 | 360 | -- | -- |
| 47.17 | 0.32 | 9.28 | 0.338 | 0.621 | 1.43 | -- | -- | -0.0888 | 7.4 | 16.13 | 364 | -- | -- |
| 57.77 | 0.354 | 9.27 | 0.397 | -- | 1.15 | -- | 0.296 | -0.0449 | -- | 14.87 | 1612 | -- | -- |
| 70.96 | 0.395 | 9.24 | 0.695 | 0.308 | -- | -0.839 | -- | 0.135 | 9.31 | -- | -- | -- | -- |
| 73.19 | 0.401 | 9.24 | 0.668 | 0.313 | -- | -- | -- | 0.136 | 10.2 | -- | -- | -- | -- |
| 57.59 | 0.353 | 9.29 | 0.302 | -- | 1.13 | -- | -- | -0.0642 | -- | 14.3 | 1614 | -- | -- |
| 49.79 | 0.329 | 9.29 | -- | 0.66 | 1.71 | -- | -- | -0.145 | 7.25 | 14.2 | 362 | -- | -- |
| 79.14 | 0.416 | 9.25 | 0.664 | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
| 84.95 | 0.431 | 9.26 | -- | 0.31 | -- | -- | -- | 0.0618 | 10.1 | -- | -- | -- | -- |
| 58.26 | 0.356 | 9.3 | -- | -- | 1.18 | -- | -- | -0.108 | -- | 9.248 | 4497 | -- | -- |
| 90.75 | 0.445 | 9.26 | -- | -- | -- | -- | -- | 0.0619 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 3 | 45.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 5 | 45.72 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 7 | 45.73 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 13 | 46.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 28 | 46.24 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 32 | 46.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 53 | 46.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 58 | 46.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 59 | 46.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 77 | 46.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 99 | 47.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 124 | 47.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 182 | 47.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 12 |
| 214 | 47.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 279 | 47.72 | temperature | 15 | 1440 | > th | dose dependent | sin | 7 | NA |
| 281 | 47.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 325 | 47.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 326 | 47.83 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 408 | 48.05 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 431 | 48.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 443 | 48.12 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 809 | 48.87 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 820 | 48.88 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 855 | 48.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 5 |
| 956 | 49.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |