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Os03g0802200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.32 (0.032) R2 : 0.409
β1 : 1.16 (0.117) R2dD : 0.133 R2D : 0.101
β2 : 1.19 (0.0831) R2dC : 0.268 R2C : 0.267
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.284 (0.0682) R2dN8 : 0.0302 R2N8 : 0.00414
σ : 0.601
deviance : 164.45
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_____
C
peak time of C : 6.67
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
143.91 0.564 9.35 1.25 0.345 1.81 1.85 1.17 0.323 14.4 0.1101 742 -- --
144.82 0.56 9.34 1.28 0.307 1.82 1.54 -- 0.316 13.6 0.1199 751 -- --
150.32 0.575 9.31 1.18 1.19 -0.032 -- -1.47 0.291 6.56 0.1699 769 -- --
153.41 0.577 9.34 1.32 0.242 1.71 -- -- 0.332 13.6 0.07659 757 -- --
161.73 0.592 9.32 1.14 -- 1.54 -- -1.61 0.383 -- 0.4953 793 -- --
163.02 0.599 9.31 1.15 1.18 -- 0.828 -- 0.288 6.9 -- -- -- --
164.45 0.601 9.32 1.16 1.19 -- -- -- 0.284 6.67 -- -- -- --
154.09 0.578 9.34 1.35 -- 1.76 -- -- 0.341 -- 0.1603 831 -- --
197.8 0.659 9.36 -- 1.15 -0.289 -- -- 0.135 5.53 0.07659 757 -- --
238.43 0.722 9.34 1.19 -- -- -- -- 0.308 -- -- -- -- --
199.96 0.661 9.35 -- 1.21 -- -- -- 0.155 6.61 -- -- -- --
199.15 0.657 9.35 -- -- 1.59 -- -- 0.234 -- 1.491 810 -- --
275.69 0.775 9.37 -- -- -- -- -- 0.176 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 130.47 radiation 1.0 720 < th dose dependent rect. 8 8
2 130.74 radiation 1.0 720 < th dose independent rect. 8 7
11 132.94 radiation 1.0 720 < th dose independent rect. 13 2
17 133.53 radiation 1.0 1440 < th dose independent rect. 24 5
26 134.35 radiation 10.0 1440 < th dose independent rect. 19 10
27 134.35 radiation 10.0 1440 < th dose dependent rect. 24 5
35 135.33 radiation 10.0 1440 < th dose dependent rect. 19 10
38 135.60 humidity 90.0 720 > th dose independent rect. 11 2
39 135.67 radiation 10.0 1440 < th dose independent rect. 4 1
40 135.72 radiation 10.0 1440 < th dose dependent rect. 4 1
43 135.90 humidity 90.0 720 > th dose dependent rect. 11 2
46 136.11 radiation 1.0 1440 < th dose independent rect. 21 8
50 136.42 radiation 1.0 720 < th dose dependent rect. 11 14
60 137.14 radiation 1.0 720 < th dose independent rect. 11 14
61 137.15 radiation 10.0 1440 < th dose dependent rect. 21 8
113 138.35 radiation 1.0 270 > th dose independent rect. 7 22
117 138.41 radiation 1.0 270 > th dose independent rect. 7 12
128 138.44 radiation 1.0 720 > th dose independent rect. 7 8
146 138.87 radiation 1.0 720 < th dose dependent sin 20 NA
148 138.89 radiation 1.0 720 < th dose independent sin 20 NA
149 138.91 temperature 25.0 270 > th dose independent rect. 9 10
158 139.05 humidity 60.0 14400 > th dose independent rect. 24 7
162 139.17 radiation 1.0 720 > th dose independent sin 19 NA
188 139.53 radiation 1.0 720 > th dose independent rect. 11 8
204 139.65 radiation 1.0 270 > th dose independent sin 23 NA
252 140.16 radiation 1.0 1440 > th dose independent rect. 4 1
263 140.16 radiation 1.0 1440 > th dose dependent rect. 4 1
276 140.18 temperature 15.0 720 > th dose independent rect. 3 16
280 140.21 temperature 15.0 720 > th dose independent rect. 15 16
281 140.21 radiation 1.0 720 < th dose dependent rect. 4 22
299 140.51 humidity 70.0 720 > th dose independent rect. 17 14
312 140.65 temperature 25.0 720 > th dose independent rect. 7 8
319 140.73 temperature 25.0 720 > th dose independent rect. 8 6
340 140.89 humidity 60.0 14400 > th dose independent rect. 21 10
346 140.95 temperature 15.0 720 > th dose independent rect. 19 8
396 141.41 temperature 15.0 720 > th dose independent rect. 7 8
410 141.56 humidity 70.0 720 > th dose independent rect. 17 8
414 141.57 humidity 60.0 720 > th dose independent rect. 15 16
431 141.74 wind 7.0 720 < th dose independent rect. 13 6
436 141.89 humidity 70.0 720 > th dose independent rect. 19 8
449 142.07 temperature 30.0 4320 > th dose dependent rect. 8 1
463 142.09 humidity 70.0 720 > th dose independent rect. 17 10
469 142.14 wind 9.0 720 < th dose independent rect. 3 16
473 142.15 humidity 70.0 720 > th dose independent rect. 17 6
486 142.37 radiation 1.0 720 < th dose dependent rect. 4 14
512 142.89 temperature 25.0 270 > th dose independent sin 21 NA
514 142.89 radiation 20.0 720 < th dose dependent rect. 11 11
524 142.97 radiation 20.0 270 < th dose dependent rect. 12 19
536 143.10 wind 7.0 720 > th dose independent rect. 14 3
544 143.14 atmosphere 1015.0 720 < th dose independent rect. 3 16
556 143.22 atmosphere 1005.0 10 > th dose dependent rect. 12 7
574 143.29 wind 9.0 720 < th dose independent rect. 7 8
576 143.29 radiation 1.0 720 < th dose independent rect. 4 22
647 143.69 radiation 30.0 14400 < th dose independent rect. 17 12
654 143.77 humidity 70.0 720 > th dose independent rect. 19 1
659 143.81 radiation 1.0 720 < th dose dependent rect. 19 23
668 143.88 humidity 70.0 720 > th dose independent sin 14 NA
671 143.90 temperature 30.0 720 < th dose independent rect. 19 8
672 143.90 humidity 50.0 720 > th dose independent rect. 19 8
673 143.90 atmosphere 995.0 720 > th dose independent rect. 19 8
679 143.90 precipitation 0.1 720 < th dose independent rect. 7 8
684 143.90 precipitation 0.1 720 < th dose dependent rect. 7 8
693 143.96 wind 9.0 720 < th dose independent rect. 19 8
714 144.01 wind 1.0 43200 < th dose dependent rect. 7 1
716 144.02 humidity 60.0 720 > th dose independent rect. 15 8
726 144.08 wind 1.0 4320 < th dose independent rect. 6 2
738 144.09 wind 7.0 720 < th dose independent rect. 7 12
753 144.11 humidity 60.0 720 > th dose independent rect. 15 10
767 144.18 radiation 40.0 270 < th dose dependent rect. 12 11
771 144.20 radiation 40.0 720 < th dose independent rect. 15 16
814 144.36 atmosphere 1015.0 720 < th dose independent rect. 7 8
860 144.57 radiation 1.0 720 < th dose independent rect. 19 23
863 144.58 wind 1.0 4320 < th dose dependent rect. 6 2
869 144.60 radiation 20.0 270 < th dose independent rect. 12 11
876 144.63 temperature 25.0 270 > th dose dependent rect. 10 9
877 144.64 humidity 70.0 720 > th dose independent rect. 13 12
897 144.69 wind 1.0 43200 < th dose dependent rect. 6 4
908 144.75 wind 7.0 720 < th dose independent rect. 16 3
914 144.76 humidity 70.0 720 > th dose independent rect. 13 14
932 144.83 wind 1.0 720 > th dose dependent rect. 13 7
947 144.86 radiation 20.0 270 < th dose independent rect. 12 19
955 144.89 wind 5.0 720 > th dose dependent rect. 15 1
960 144.90 wind 5.0 720 > th dose dependent rect. 14 4