Os03g0800900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0800900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.49 | 0.447 | 8.15 | -1.92 | 0.949 | -0.999 | 0.065 | 3.73 | 0.282 | 20.6 | 30.06 | 1514 | -- | -- |
| 94.68 | 0.453 | 8.06 | -1.5 | 0.944 | -1.65 | 0.0617 | -- | 0.47 | 20.5 | 19.97 | 4648 | -- | -- |
| 90.47 | 0.443 | 8.15 | -1.92 | 0.945 | -0.997 | -- | 3.72 | 0.285 | 20.6 | 29.81 | 1545 | -- | -- |
| 94.69 | 0.453 | 8.06 | -1.52 | 0.945 | -1.68 | -- | -- | 0.459 | 20.6 | 19.97 | 4642 | -- | -- |
| 117.56 | 0.505 | 8.12 | -1.86 | -- | -1.74 | -- | 3.79 | 0.284 | -- | 45.81 | 680 | -- | -- |
| 121.62 | 0.517 | 8 | -0.759 | 0.945 | -- | 0.158 | -- | 0.724 | 20.6 | -- | -- | -- | -- |
| 121.7 | 0.517 | 8 | -0.764 | 0.945 | -- | -- | -- | 0.725 | 20.6 | -- | -- | -- | -- |
| 128.39 | 0.528 | 8.03 | -1.18 | -- | -1.67 | -- | -- | 0.464 | -- | 41.86 | 699 | -- | -- |
| 127.42 | 0.529 | 8.01 | -- | 1.01 | -0.796 | -- | -- | 0.704 | 21 | 23.9 | 842 | -- | -- |
| 172 | 0.613 | 7.97 | -0.767 | -- | -- | -- | -- | 0.716 | -- | -- | -- | -- | -- |
| 137.09 | 0.548 | 7.98 | -- | 0.948 | -- | -- | -- | 0.81 | 20.6 | -- | -- | -- | -- |
| 161.63 | 0.592 | 7.99 | -- | -- | -1.23 | -- | -- | 0.651 | -- | 84.78 | 667 | -- | -- |
| 187.51 | 0.639 | 7.96 | -- | -- | -- | -- | -- | 0.801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.64 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 8 | 88.94 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 30 | 89.31 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 36 | 89.40 | humidity | 60 | 43200 | < th | dose independent | sin | 7 | NA |
| 44 | 89.45 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 50 | 89.49 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 52 | 89.50 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 55 | 89.52 | humidity | 60 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 61 | 89.54 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 64 | 89.55 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 78 | 89.61 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 79 | 89.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 91 | 89.66 | humidity | 60 | 43200 | > th | dose independent | sin | 7 | NA |
| 110 | 89.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 23 |
| 119 | 89.81 | humidity | 70 | 43200 | < th | dose dependent | sin | 8 | NA |
| 144 | 89.94 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 166 | 90.04 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 176 | 90.06 | humidity | 60 | 43200 | < th | dose dependent | rect. | 23 | 18 |
| 179 | 90.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 189 | 90.09 | humidity | 60 | 43200 | < th | dose dependent | sin | 4 | NA |
| 260 | 90.17 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 271 | 90.18 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 289 | 90.20 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 344 | 90.23 | temperature | 30 | 1440 | < th | dose dependent | sin | 1 | NA |
| 345 | 90.23 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 410 | 90.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 450 | 90.35 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 494 | 90.39 | temperature | 10 | 1440 | > th | dose dependent | sin | 1 | NA |
| 597 | 90.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 766 | 90.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 805 | 90.65 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 806 | 90.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 6 |
| 820 | 90.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 838 | 90.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 852 | 90.68 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 891 | 90.71 | temperature | 15 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 969 | 90.76 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 994 | 90.77 | radiation | 30 | 43200 | < th | dose independent | rect. | 5 | 2 |