Os03g0800400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os03g0800400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.23 | 0.449 | 9.86 | 5.01 | 0.27 | -2.33 | -0.581 | 4.2 | 0.734 | 23 | 26 | 1293 | -- | -- |
| 104.85 | 0.477 | 9.98 | 4.28 | 0.43 | -2.39 | -0.486 | -- | 0.72 | 21.1 | 24.92 | 2392 | -- | -- |
| 92.64 | 0.448 | 9.87 | 4.97 | 0.274 | -2.31 | -- | 3.95 | 0.719 | 23.1 | 26.01 | 1292 | -- | -- |
| 100.05 | 0.466 | 9.97 | 3.97 | 0.393 | -2.1 | -- | -- | 0.568 | 21.5 | 25.5 | 2404 | -- | -- |
| 95.56 | 0.455 | 9.87 | 5 | -- | -2.2 | -- | 3.88 | 0.701 | -- | 26.21 | 1389 | -- | -- |
| 245.29 | 0.734 | 10 | 3.32 | 0.0948 | -- | 0.821 | -- | 0.369 | 14.1 | -- | -- | -- | -- |
| 246.58 | 0.735 | 10 | 3.35 | 0.186 | -- | -- | -- | 0.376 | 17.7 | -- | -- | -- | -- |
| 99.41 | 0.464 | 9.98 | 4 | -- | -1.81 | -- | -- | 0.543 | -- | 25.61 | 1402 | -- | -- |
| 481.36 | 1.02 | 10.1 | -- | 0.0733 | -1.11 | -- | -- | -0.179 | 4.03 | 28.7 | 1304 | -- | -- |
| 248.39 | 0.736 | 10 | 3.34 | -- | -- | -- | -- | 0.371 | -- | -- | -- | -- | -- |
| 542.43 | 1.09 | 10.1 | -- | 0.14 | -- | -- | -- | 0.00265 | 18.9 | -- | -- | -- | -- |
| 481.39 | 1.02 | 10.1 | -- | -- | -1.1 | -- | -- | -0.164 | -- | 28.7 | 1310 | -- | -- |
| 543.46 | 1.09 | 10.1 | -- | -- | -- | -- | -- | 0.00032 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 3 | 94.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 68 | 94.54 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 83 | 94.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 84 | 94.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 124 | 95.31 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 186 | 96.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 242 | 97.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 244 | 97.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 246 | 97.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 16 |
| 342 | 99.18 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 403 | 99.76 | temperature | 30 | 1440 | < th | dose independent | sin | 2 | NA |
| 417 | 100.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 475 | 100.69 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 480 | 100.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 500 | 100.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 506 | 100.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 512 | 100.87 | temperature | 30 | 1440 | > th | dose independent | sin | 1 | NA |
| 513 | 100.87 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 646 | 101.68 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 880 | 104.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 885 | 104.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 908 | 104.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 916 | 104.45 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 937 | 104.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 940 | 104.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 11 |