Os03g0799300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0799300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217.23 | 0.692 | 4.03 | -0.981 | 0.76 | 4.92 | -0.582 | 11.4 | -0.467 | 1.08 | 9.2 | 211 | -- | -- |
| 218.34 | 0.688 | 3.99 | -1.09 | 0.759 | 2.64 | -0.702 | -- | -0.464 | 1.05 | 10.37 | 183 | -- | -- |
| 218.57 | 0.689 | 4.03 | -0.962 | 0.759 | 4.99 | -- | 12 | -0.466 | 1.18 | 9.201 | 210 | -- | -- |
| 219.08 | 0.689 | 3.99 | -1.07 | 0.757 | 2.59 | -- | -- | -0.464 | 1.21 | 10.4 | 194 | -- | -- |
| 253.64 | 0.742 | 4.03 | -0.96 | -- | 5.18 | -- | 14.2 | -0.466 | -- | 9.394 | 210 | -- | -- |
| 231.12 | 0.713 | 4 | -1.18 | 0.722 | -- | -0.635 | -- | -0.502 | 0.711 | -- | -- | -- | -- |
| 232.78 | 0.714 | 4 | -1.16 | 0.725 | -- | -- | -- | -0.499 | 0.885 | -- | -- | -- | -- |
| 254.36 | 0.743 | 3.98 | -1.05 | -- | 2.32 | -- | -- | -0.452 | -- | 10.4 | 221 | -- | -- |
| 248.19 | 0.734 | 3.96 | -- | 0.752 | 3.22 | -- | -- | -0.337 | 1.2 | 10.29 | 225 | -- | -- |
| 265.6 | 0.762 | 3.99 | -1.13 | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
| 268.24 | 0.766 | 3.97 | -- | 0.707 | -- | -- | -- | -0.37 | 0.812 | -- | -- | -- | -- |
| 282.8 | 0.783 | 3.95 | -- | -- | 2.85 | -- | -- | -0.33 | -- | 10.37 | 199 | -- | -- |
| 299.47 | 0.808 | 3.96 | -- | -- | -- | -- | -- | -0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.17 | wind | 3 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 2 | 210.42 | wind | 3 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 4 | 210.65 | wind | 5 | 270 | > th | dose independent | rect. | 14 | 4 |
| 36 | 213.82 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 18 |
| 51 | 214.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 56 | 214.69 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 5 |
| 65 | 214.88 | humidity | 60 | 270 | > th | dose independent | rect. | 14 | 3 |
| 70 | 215.09 | wind | 9 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 76 | 215.28 | wind | 9 | 10 | > th | dose independent | rect. | 17 | 3 |
| 87 | 215.39 | wind | 9 | 270 | > th | dose independent | rect. | 13 | 22 |
| 98 | 215.57 | wind | 9 | 270 | > th | dose independent | rect. | 13 | 5 |
| 107 | 215.64 | wind | 9 | 10 | > th | dose independent | sin | 15 | NA |
| 109 | 215.67 | wind | 9 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 122 | 215.87 | wind | 9 | 10 | > th | dose dependent | sin | 15 | NA |
| 141 | 216.03 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 150 | 216.10 | wind | 7 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 164 | 216.23 | wind | 9 | 10 | < th | dose independent | sin | 13 | NA |
| 168 | 216.26 | wind | 9 | 270 | > th | dose independent | sin | 18 | NA |
| 170 | 216.26 | radiation | 10 | 10 | < th | dose independent | rect. | 14 | 6 |
| 180 | 216.33 | radiation | 30 | 270 | < th | dose independent | rect. | 15 | 2 |
| 185 | 216.42 | wind | 9 | 270 | > th | dose dependent | sin | 19 | NA |
| 201 | 216.56 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 4 |
| 205 | 216.59 | wind | 9 | 270 | < th | dose independent | rect. | 17 | 23 |
| 210 | 216.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 212 | 216.67 | humidity | 60 | 30 | > th | dose independent | rect. | 14 | 6 |
| 274 | 216.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 276 | 216.91 | radiation | 10 | 90 | < th | dose independent | rect. | 14 | 5 |
| 280 | 216.93 | wind | 9 | 270 | > th | dose dependent | rect. | 9 | 9 |
| 298 | 216.96 | wind | 9 | 90 | < th | dose independent | sin | 14 | NA |
| 308 | 216.99 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 2 |
| 383 | 217.13 | wind | 9 | 270 | > th | dose independent | rect. | 9 | 9 |
| 444 | 217.17 | humidity | 60 | 270 | > th | dose independent | rect. | 13 | 19 |
| 456 | 217.19 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 459 | 217.20 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 500 | 217.25 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 546 | 217.35 | temperature | 20 | 30 | > th | dose independent | rect. | 14 | 6 |
| 559 | 217.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 562 | 217.37 | humidity | 60 | 270 | > th | dose independent | rect. | 14 | 17 |
| 572 | 217.41 | radiation | 1 | 270 | > th | dose independent | rect. | 15 | 2 |
| 574 | 217.41 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 4 |
| 575 | 217.41 | wind | 9 | 90 | > th | dose independent | rect. | 15 | 11 |
| 576 | 217.41 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 11 |
| 595 | 217.44 | wind | 3 | 10 | > th | dose independent | rect. | 16 | 4 |
| 606 | 217.50 | wind | 7 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 631 | 217.55 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 6 |
| 632 | 217.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 663 | 217.59 | temperature | 10 | 30 | > th | dose dependent | rect. | 20 | 18 |
| 669 | 217.60 | temperature | 10 | 10 | > th | dose dependent | rect. | 20 | 11 |
| 774 | 217.71 | wind | 9 | 270 | > th | dose dependent | no | NA | NA |
| 814 | 217.73 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 6 |
| 820 | 217.74 | humidity | 90 | 270 | < th | dose independent | rect. | 15 | 2 |
| 821 | 217.74 | humidity | 80 | 10 | < th | dose independent | rect. | 16 | 4 |
| 835 | 217.75 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 837 | 217.76 | radiation | 1 | 270 | > th | dose independent | sin | 14 | NA |
| 942 | 217.90 | wind | 9 | 270 | > th | dose independent | no | NA | NA |
| 995 | 217.93 | radiation | 1 | 270 | > th | dose independent | rect. | 14 | 4 |