Os03g0799200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF593 family protein.
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Os03g0799200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF593 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.87 | 0.782 | 5.7 | -1.73 | 0.945 | 1.96 | 1.74 | 0.571 | -1.29 | 8.55 | 24.9 | 985 | -- | -- |
| 277.23 | 0.775 | 5.69 | -1.64 | 0.951 | 1.91 | 1.84 | -- | -1.27 | 8.56 | 25.03 | 995 | -- | -- |
| 285.64 | 0.787 | 5.71 | -1.81 | 0.93 | 2.02 | -- | 1.28 | -1.31 | 8.31 | 24.98 | 965 | -- | -- |
| 287.69 | 0.79 | 5.69 | -1.57 | 0.965 | 1.94 | -- | -- | -1.25 | 8.26 | 25.1 | 1020 | -- | -- |
| 321.59 | 0.835 | 5.71 | -1.7 | -- | 2.37 | -- | 1.19 | -1.2 | -- | 26.4 | 723 | -- | -- |
| 330.27 | 0.852 | 5.78 | -2.2 | 1.11 | -- | 1.79 | -- | -1.67 | 9.08 | -- | -- | -- | -- |
| 341.4 | 0.865 | 5.77 | -2.14 | 1.11 | -- | -- | -- | -1.67 | 8.98 | -- | -- | -- | -- |
| 323.17 | 0.837 | 5.69 | -1.49 | -- | 2.29 | -- | -- | -1.15 | -- | 26.7 | 724 | -- | -- |
| 311.22 | 0.822 | 5.63 | -- | 1.11 | 2.95 | -- | -- | -0.987 | 8.91 | 22.4 | 6252 | -- | -- |
| 411.53 | 0.948 | 5.8 | -2.14 | -- | -- | -- | -- | -1.66 | -- | -- | -- | -- | -- |
| 461.65 | 1.01 | 5.72 | -- | 1.1 | -- | -- | -- | -1.43 | 9.12 | -- | -- | -- | -- |
| 374.6 | 0.901 | 5.63 | -- | -- | 2.88 | -- | -- | -0.873 | -- | 26.68 | 740 | -- | -- |
| 532 | 1.08 | 5.75 | -- | -- | -- | -- | -- | -1.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 271.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 2 | 271.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 15 | 275.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 17 | 275.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 20 | 276.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 25 | 276.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 28 | 276.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 33 | 276.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 59 | 276.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 86 | 277.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 155 | 277.94 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 175 | 278.11 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 204 | 278.41 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 219 | 278.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 236 | 278.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 294 | 278.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 298 | 278.90 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 329 | 279.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 356 | 279.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 402 | 279.47 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 405 | 279.48 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 497 | 279.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 577 | 280.21 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 16 |
| 625 | 280.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 756 | 280.66 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 766 | 280.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 835 | 280.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 951 | 281.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 993 | 281.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 14 |
| 999 | 281.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |