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Os03g0796800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.68 (0.0196) R2 : 0.523
β1 : 1.34 (0.0718) R2dD : 0.38 R2D : 0.183
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.652 (0.0418) R2dN8 : 0.34 R2N8 : 0.143
σ : 0.368
deviance : 61.99
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41 0.301 7.74 0.849 0.36 0.85 -0.044 -0.352 0.448 14.2 19.47 2509 -- --
41.18 0.299 7.73 0.903 0.359 0.929 -0.0382 -- 0.462 14.2 19.37 2509 -- --
41 0.298 7.74 0.85 0.36 0.851 -- -0.343 0.448 14.2 19.47 2509 -- --
41.17 0.299 7.73 0.906 0.361 0.94 -- -- 0.459 14.2 19.28 2513 -- --
48.23 0.323 7.73 0.852 -- 0.826 -- -0.334 0.45 -- 19.37 2792 -- --
56.5 0.352 7.68 1.35 0.304 -- 0.0986 -- 0.659 14.4 -- -- -- --
56.54 0.352 7.68 1.36 0.304 -- -- -- 0.66 14.4 -- -- -- --
48.29 0.324 7.73 0.846 -- 0.961 -- -- 0.447 -- 19.17 3235 -- --
51.37 0.334 7.76 -- 0.345 1.46 -- -- 0.303 14.2 19.1 8150 -- --
61.99 0.368 7.68 1.34 -- -- -- -- 0.652 -- -- -- -- --
105.07 0.479 7.71 -- 0.278 -- -- -- 0.509 14.3 -- -- -- --
53.43 0.34 7.77 -- -- 1.32 -- -- 0.263 -- 17.6 24484 -- --
109.64 0.489 7.72 -- -- -- -- -- 0.503 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.17 temperature 20 1440 < th dose dependent rect. 3 2
4 41.31 temperature 20 1440 < th dose independent rect. 22 13
6 41.33 temperature 20 1440 > th dose independent rect. 22 14
10 41.36 wind 1 14400 > th dose independent rect. 23 3
50 41.60 temperature 20 4320 < th dose dependent rect. 22 1
54 41.63 temperature 20 1440 > th dose independent sin 7 NA
55 41.64 temperature 20 1440 < th dose independent sin 7 NA
99 41.85 wind 1 43200 < th dose independent rect. 24 2
114 41.92 humidity 80 43200 > th dose independent rect. 6 1
116 41.93 temperature 20 1440 > th dose independent rect. 5 3
123 41.96 humidity 80 43200 < th dose independent rect. 6 1
124 41.96 temperature 20 4320 > th dose independent rect. 18 5
139 42.01 humidity 70 43200 > th dose dependent rect. 19 4
143 42.02 wind 3 43200 < th dose dependent rect. 5 1
151 42.05 temperature 20 14400 < th dose independent rect. 20 2
157 42.08 temperature 20 1440 < th dose independent rect. 5 3
160 42.09 humidity 70 43200 > th dose dependent rect. 18 6
181 42.17 temperature 20 14400 > th dose independent rect. 20 2
187 42.19 temperature 20 4320 < th dose independent rect. 18 5
191 42.20 temperature 20 1440 < th dose independent rect. 22 3
195 42.21 humidity 80 43200 > th dose independent rect. 4 5
199 42.22 temperature 20 1440 < th dose independent rect. 21 7
201 42.22 humidity 70 43200 > th dose dependent rect. 20 2
207 42.24 temperature 20 1440 > th dose independent rect. 21 7
217 42.26 humidity 80 43200 < th dose independent rect. 5 4
247 42.33 temperature 20 1440 > th dose independent rect. 22 3
252 42.33 wind 3 43200 < th dose dependent rect. 18 14
258 42.35 wind 7 43200 < th dose dependent rect. 17 15
264 42.37 temperature 20 1440 < th dose independent rect. 23 1
321 42.46 wind 1 43200 > th dose dependent rect. 17 15
386 42.56 wind 3 43200 < th dose dependent rect. 5 9
439 42.62 wind 3 43200 < th dose dependent rect. 18 19
457 42.64 wind 3 43200 < th dose dependent rect. 20 18
463 42.65 humidity 90 43200 < th dose dependent rect. 6 1
469 42.66 wind 3 43200 < th dose independent rect. 5 10
472 42.66 wind 3 43200 < th dose dependent sin 12 NA
491 42.68 wind 9 43200 < th dose dependent rect. 21 5
538 42.73 wind 9 43200 < th dose independent rect. 9 5
542 42.73 wind 3 43200 < th dose independent rect. 4 20
544 42.73 wind 1 43200 > th dose independent rect. 5 21
553 42.74 humidity 80 43200 > th dose independent rect. 18 15
554 42.74 humidity 80 43200 < th dose independent rect. 18 15
565 42.75 wind 9 43200 > th dose independent rect. 9 5
567 42.75 humidity 80 43200 < th dose independent rect. 24 10
571 42.75 humidity 80 43200 > th dose independent rect. 14 20
581 42.75 wind 3 43200 < th dose dependent rect. 4 22
587 42.76 wind 3 43200 > th dose independent rect. 5 19
603 42.77 wind 3 43200 > th dose independent rect. 5 10
613 42.77 wind 3 43200 < th dose dependent rect. 4 20
619 42.78 wind 3 43200 < th dose independent rect. 5 16
625 42.78 wind 9 43200 < th dose dependent rect. 22 1
635 42.79 humidity 80 43200 < th dose independent rect. 14 20
677 42.81 wind 3 43200 < th dose independent rect. 5 14
684 42.81 wind 1 43200 > th dose dependent sin 12 NA
693 42.82 humidity 80 43200 < th dose independent sin 10 NA
713 42.82 wind 9 43200 > th dose dependent rect. 10 8
721 42.82 wind 3 43200 < th dose dependent rect. 11 22
724 42.83 wind 3 43200 > th dose independent rect. 5 14
751 42.84 wind 3 43200 < th dose dependent rect. 18 8
771 42.85 wind 1 43200 > th dose dependent rect. 22 1
774 42.85 wind 9 43200 < th dose dependent rect. 18 10
784 42.86 humidity 80 43200 > th dose independent sin 10 NA
842 42.88 wind 9 43200 > th dose dependent rect. 10 11
873 42.90 wind 3 43200 < th dose independent sin 1 NA
884 42.90 wind 3 43200 < th dose independent rect. 17 22
885 42.90 wind 3 43200 < th dose independent rect. 1 23
899 42.91 temperature 20 1440 > th dose independent rect. 3 1
911 42.91 wind 1 43200 > th dose dependent rect. 18 9
922 42.92 humidity 80 43200 > th dose independent rect. 14 13
933 42.92 wind 3 43200 > th dose independent rect. 1 23
934 42.92 wind 3 43200 < th dose independent rect. 10 23
971 42.93 wind 1 43200 > th dose dependent rect. 20 6
987 42.94 humidity 80 43200 > th dose independent rect. 15 11
999 42.94 wind 3 43200 > th dose independent rect. 11 22