Os03g0796100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os03g0796100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 291.63 | 0.802 | 9.88 | 1.45 | 0.347 | 3.97 | 0.452 | 4.68 | -0.321 | 10.2 | 25.16 | 2584 | 7.57 | -- |
| 311.9 | 0.823 | 9.74 | 2.37 | 0.236 | 3.63 | 0.906 | -- | -0.0984 | 10.5 | 25.41 | 2451 | 5.47 | -- |
| 292.39 | 0.796 | 9.88 | 1.45 | 0.341 | 3.96 | -- | 4.79 | -0.319 | 10.4 | 25.13 | 2576 | 7.55 | -- |
| 315.55 | 0.827 | 9.75 | 2.42 | 0.217 | 3.65 | -- | -- | -0.0913 | 10.4 | 25.71 | 2482 | 5.54 | -- |
| 297.8 | 0.804 | 9.87 | 1.47 | -- | 4.08 | -- | 4.8 | -0.261 | -- | 25.3 | 2484 | 6.91 | -- |
| 531.73 | 1.08 | 9.94 | 1.09 | 0.674 | -- | 0.555 | -- | -1 | 11.6 | -- | -- | -- | -- |
| 533.04 | 1.08 | 9.94 | 1.11 | 0.671 | -- | -- | -- | -0.998 | 11.7 | -- | -- | -- | -- |
| 316.78 | 0.829 | 9.76 | 2.41 | -- | 3.76 | -- | -- | -0.109 | -- | 27.23 | 2443 | 4.77 | -- |
| 439.19 | 0.976 | 9.88 | -- | 0.838 | 2.91 | -- | -- | -0.647 | 15.5 | 32.85 | 1941 | 4.11 | -- |
| 561.38 | 1.11 | 9.96 | 1.09 | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
| 565.47 | 1.11 | 9.97 | -- | 0.658 | -- | -- | -- | -1.12 | 11.6 | -- | -- | -- | -- |
| 441.62 | 0.979 | 9.88 | -- | -- | 2.77 | -- | -- | -0.654 | -- | 31.14 | 2440 | 4.74 | -- |
| 592.72 | 1.14 | 9.98 | -- | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 284.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 29 | 294.25 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 33 | 296.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 34 | 296.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 37 | 296.88 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 51 | 299.05 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 56 | 299.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 82 | 300.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 85 | 300.62 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 135 | 302.31 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 363 | 306.98 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 591 | 310.57 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 730 | 313.00 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 736 | 313.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 742 | 313.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 757 | 313.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 791 | 313.97 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 842 | 314.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 907 | 315.50 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 949 | 316.18 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |