Os03g0795200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os03g0795200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.33 | 0.416 | 10.3 | 0.626 | 1.51 | 0.469 | -0.554 | -1.29 | 0.0491 | 21.8 | 1013 | 5590 | -- | -- |
| 82.06 | 0.422 | 10.3 | 0.436 | 1.52 | 0.514 | -0.369 | -- | -0.0377 | 21.7 | 1015 | 6357 | -- | -- |
| 79.33 | 0.415 | 10.3 | 0.667 | 1.51 | 0.43 | -- | -1.25 | 0.0555 | 21.8 | 1013 | 6118 | -- | -- |
| 82.03 | 0.422 | 10.4 | 0.604 | 1.48 | 0.752 | -- | -- | 0.000281 | 21.7 | 1016 | 6301 | -- | -- |
| 216.14 | 0.685 | 10.3 | 0.696 | -- | 0.476 | -- | -1.18 | 0.0587 | -- | 1014 | 6223 | -- | -- |
| 90.77 | 0.447 | 10.4 | 0.181 | 1.52 | -- | -0.61 | -- | -0.111 | 21.8 | -- | -- | -- | -- |
| 92.19 | 0.45 | 10.4 | 0.204 | 1.52 | -- | -- | -- | -0.109 | 21.8 | -- | -- | -- | -- |
| 218.54 | 0.689 | 10.3 | 0.593 | -- | 0.814 | -- | -- | 0.0208 | -- | 1016 | 6249 | -- | -- |
| 87.07 | 0.435 | 10.4 | -- | 1.5 | 0.726 | -- | -- | -0.0359 | 21.8 | 1015 | 4799 | -- | -- |
| 230.46 | 0.709 | 10.3 | 0.219 | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
| 93.29 | 0.452 | 10.4 | -- | 1.52 | -- | -- | -- | -0.132 | 21.8 | -- | -- | -- | -- |
| 224.7 | 0.698 | 10.3 | -- | -- | 0.68 | -- | -- | -0.0771 | -- | 1015 | 4809 | -- | -- |
| 231.73 | 0.711 | 10.3 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.32 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 14 |
| 3 | 76.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 18 |
| 8 | 76.52 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 18 |
| 19 | 77.05 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 20 | 6 |
| 21 | 77.17 | humidity | 80.0 | 10 | < th | dose independent | sin | 3 | NA |
| 25 | 77.25 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 18 |
| 36 | 77.43 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 43 | 77.54 | humidity | 80.0 | 90 | < th | dose independent | sin | 5 | NA |
| 46 | 77.64 | humidity | 80.0 | 10 | > th | dose independent | sin | 2 | NA |
| 67 | 77.89 | humidity | 80.0 | 90 | < th | dose independent | rect. | 21 | 16 |
| 102 | 78.29 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 104 | 78.30 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 106 | 78.31 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 109 | 78.32 | humidity | 80.0 | 30 | > th | dose independent | rect. | 23 | 21 |
| 116 | 78.36 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 135 | 78.38 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 17 |
| 158 | 78.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 159 | 78.58 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 21 |
| 160 | 78.59 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 165 | 78.61 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 169 | 78.62 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 2 | 18 |
| 183 | 78.74 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 6 |
| 186 | 78.74 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 17 |
| 207 | 78.84 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 209 | 78.85 | temperature | 20.0 | 720 | < th | dose independent | sin | 23 | NA |
| 230 | 78.94 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 240 | 78.98 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 266 | 79.06 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 270 | 79.06 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 293 | 79.11 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 295 | 79.12 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 2 | 14 |
| 298 | 79.12 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 334 | 79.17 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 373 | 79.21 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 385 | 79.22 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 408 | 79.25 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 427 | 79.27 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 18 |
| 429 | 79.28 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 462 | 79.32 | humidity | 70.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 479 | 79.35 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 15 |
| 496 | 79.37 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 526 | 79.40 | humidity | 90.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 531 | 79.41 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 546 | 79.42 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 556 | 79.43 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 558 | 79.44 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 562 | 79.44 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 573 | 79.46 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 578 | 79.47 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 11 |
| 580 | 79.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 597 | 79.48 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 624 | 79.52 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 638 | 79.53 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 4 | 23 |
| 648 | 79.54 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 4 | 21 |
| 658 | 79.55 | atmosphere | 1010.0 | 4320 | > th | dose dependent | no | NA | NA |
| 667 | 79.55 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 728 | 79.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 19 |
| 761 | 79.63 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 799 | 79.66 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 807 | 79.67 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 811 | 79.67 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 845 | 79.69 | temperature | 15.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 965 | 79.80 | temperature | 25.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 987 | 79.82 | wind | 7.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 988 | 79.82 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 4 |