Os03g0792800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os03g0792800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.05 | 0.687 | 10.1 | -1.63 | 0.298 | 0.89 | -2.55 | -0.287 | -1.16 | 19.5 | 15.77 | 1398 | -- | -- |
| 214.21 | 0.682 | 10.1 | -1.6 | 0.286 | 0.886 | -2.55 | -- | -1.15 | 19.5 | 16.56 | 1394 | -- | -- |
| 226.51 | 0.701 | 10.1 | -1.58 | 0.418 | 0.956 | -- | -0.475 | -1.16 | 16.1 | 16.97 | 1314 | -- | -- |
| 227 | 0.702 | 10.1 | -1.55 | 0.417 | 0.948 | -- | -- | -1.16 | 16.3 | 17 | 1337 | -- | -- |
| 230.28 | 0.707 | 10.1 | -1.44 | -- | 1.16 | -- | -0.33 | -1.15 | -- | 14.42 | 2146 | -- | -- |
| 245.68 | 0.735 | 10.1 | -1.45 | 0.314 | -- | -2.53 | -- | -0.931 | 19.5 | -- | -- | -- | -- |
| 261.77 | 0.758 | 10.1 | -1.38 | 0.366 | -- | -- | -- | -0.931 | 17.7 | -- | -- | -- | -- |
| 231.05 | 0.708 | 10.1 | -1.44 | -- | 1.2 | -- | -- | -1.15 | -- | 7.132 | 2144 | -- | -- |
| 263.99 | 0.757 | 10.1 | -- | 0.482 | 1.08 | -- | -- | -1.09 | 16.6 | 45.5 | 22500 | -- | -- |
| 268.71 | 0.766 | 10.1 | -1.39 | -- | -- | -- | -- | -0.94 | -- | -- | -- | -- | -- |
| 311.93 | 0.826 | 10.1 | -- | 0.388 | -- | -- | -- | -0.778 | 17.5 | -- | -- | -- | -- |
| 263.45 | 0.756 | 10.1 | -- | -- | 1.39 | -- | -- | -0.976 | -- | 47.86 | 23797 | -- | -- |
| 319.76 | 0.835 | 10.1 | -- | -- | -- | -- | -- | -0.786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.28 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 205.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 5 | 207.17 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 10 | 209.50 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 21 | 209.52 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 24 | 209.60 | radiation | 10 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 26 | 209.71 | radiation | 20 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 27 | 209.72 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 28 | 209.85 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 31 | 209.96 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 32 | 209.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 33 | 210.00 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 35 | 210.01 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 37 | 210.03 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 40 | 210.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 9 |
| 44 | 210.11 | radiation | 1 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 60 | 210.26 | temperature | 10 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 61 | 210.26 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 62 | 210.27 | radiation | 20 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 77 | 210.51 | radiation | 30 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 151 | 211.03 | radiation | 20 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 153 | 211.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 157 | 211.05 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 171 | 211.09 | radiation | 20 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 177 | 211.10 | wind | 3 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 188 | 211.14 | radiation | 30 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 190 | 211.15 | radiation | 30 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 197 | 211.17 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 199 | 211.17 | radiation | 30 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 278 | 211.39 | radiation | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 304 | 211.53 | wind | 3 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 406 | 211.75 | temperature | 20 | 14400 | > th | dose dependent | sin | 22 | NA |
| 478 | 211.86 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 18 |
| 494 | 211.89 | temperature | 30 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 559 | 212.00 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 665 | 212.18 | wind | 5 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 666 | 212.18 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 772 | 212.38 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 809 | 212.46 | temperature | 30 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 841 | 212.51 | radiation | 1 | 1440 | > th | dose dependent | sin | 7 | NA |
| 943 | 212.63 | temperature | 30 | 14400 | < th | dose dependent | sin | 22 | NA |
| 962 | 212.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 970 | 212.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 7 |